| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpen_0393 |
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| Symbol | |
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| ID | 4600528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermofilum pendens Hrk 5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008698 |
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| Strand | + |
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| Start bp | 355204 |
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| End bp | 357588 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639773154 |
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| Product | DNA polymerase II |
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| Protein accession | YP_919805 |
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| Protein GI | 119719310 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | [TIGR00592] DNA polymerase (pol2)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGCAG GAGAAGTGCG CGAGCTGGAG TTTTGGATCC TTGATGCGAG TTACGACGTC
GTAAAGGGTC ACCCGGTCAT CTACCTCTGG GGGATAACGG AGAGTGGGGA GAGAATAGTC
GTAGCTGAAA AGAACTTCAG GCCTTACTTC TACCTAGTCC CCGAGAACGC GATCAGCGAC
GCACTCGTGG AGAGAGTTAG AACTGCTCTC CACACGTTCA AGGTTTTAAG CGTGAACGCC
ATTGAGAGGA AGCTCTTCGG AAGAACACTC AATGTTCTAA AGGTTACGAT AACGGATCCT
CGGGATGTCC CGAAGGCTAG AGAAGTTGCA GCGAAGATCC CGGGTATCCG CGACGTTCTC
GAGGCGGATA TCAGGTTCTA CATGCGCTAC ATGGTGGACA CGGGTATCTC TCCGAGCTCC
TGGGTTCTCG CTAAGGTTAG GAGCGCTCCC GTCCCGAATG GGTGGCGTGT AGACGAGTTC
TTCGAGCTTG TAGAAGCTCC GAGGTCCCTG GACAAAAAGA GCACGCCGAG GCTTAAAACC
TATGCTTTCG ACATAGAGTG CTATAACAGG TACGGGGAAC CCGACCCCGA GAGAGACCCT
GTCCTCGTGA TCAGCAGGAC CGGAGAGGAT GGTACGGTGA TTTTCTCGCA GGACGAGGGT
TCTTCCGAGA AGAAGTTACT CGAAGAATTC GTAAATGACT TAGTGCAGTA CGACCCGGAC
GTTATCCTTG GATATAACTC TAACAGGTTC GACTGGCCGT ACCTCTTGCA GCGCGCCCGT
GTAAACGGGG TTAAACTGTC TATTGGAAGA AATCTTGGAG AACCGTCACA AAGTGTCTAC
GGGCATTTCT CCGTTGTTGG TCGTGCCAAC GTGGACCTCT ACGACTACGC GAGCGAGCTA
CAGGAAGTTA AGGTAAAGAC TCTGGAGAAC GTTTCAGAGT TCCTCGGAGT CATGAAGAAA
AGCGAGAGAG TGCTCATAGA CACCAACAAG GTGTACGAGT ACTGGGATTC GAAGGACAAA
AGAAGTCTAT TGCTGCGGTA CGCGGGGGAC GATGCAAGGA GCACGTACCT TCTAGGCCAA
GTTGTGTTAC CCTTCGGCAT CCAGTTGTCG AGCCTAGTAG GCCTCCCCCT GGACCAGGTC
TTCGCAGCGT CCGTTGGCAA CAGGGTAGAG TGGTTCCTCA TCAGGCAAGC CTTCGTCTTC
AACGAGCTTG TCCCCAACTC GCGGGAGCGA GGAGAGGAGA CGTACAAGGG AGCTATCGTG
CTGAAGCCTA AACCCGGAGT CCACAAGAAG ATAGCTGTCC TCGACTTTTC GTCCATGTAC
CCCAACATCA TGATCAAGTA CAACATTTCT CCCGATACCT ACGTACCACC GGAGGAACAC
GTCGACCCTA GCGAGGTCTG GGTAGCGCCG GAGGTCGGGC ACAGGTTCAG GAAGCATCCC
CCCGGTTTCT ACAGAAAAGT TCTCGAGAGC CTTCTCGAAG CCAGGAGGCG GCTACGGGAG
AAAATGAAGA CGCTTGACCC CCGAAGCGAA GAATATAGGA TCTACGATGA AAGGCAGAAG
GCCATCAAGG TAATCACGAA CGCGACGTAC GGGTACAGCG GATGGAGTAT GGCGCGGTGG
TACAAGAGAG AAGTAGCCGA GGCGACAACG GCTTGGGGGC GTGAGCTCAT CAAGGCTACG
ATAAAAAAGG CGCAGAGCCT CGGGCTCAGC ATAATCTACG GGGACACGGA CAGCATCTTC
GTACAGTTCG ACGAGGAGAA GATCGGTAGG CTAGTAGAGT ACGTTGAGAA AGAGTTGGGC
TTTGAGATAA AGCTGGACAA GGTGTACGAA AAGGTCTTCT TCACTGAGTC CAAAAAGAAG
TACTGCGGGT TGCTCGCTGA CGGCCGGGTA GACCTTGTAG GGTTTGAGGC GGTTAGAGGC
GACTGGGCTG AGATCTCGAA GGAGATCCAG GAGAGAGTCG TAGAGATAGT GTTGAAAGAG
GAGGATCCCT GGAAAGCCGT GGACTTCGTT AGGAAAACCA TAACAGAGCT GAGCGAGGGG
AGGATACCCT TAGAGAAGCT CGTCATTTGG AAAACTCTCT CCAAGGACCT CGACGAGTAC
GAAGTTGATG CTCCGCACGT TGTCGTAGCT AGGGAGCTTA AAAGGCTTGG CTACAGGGTG
GGGAAGGGGG CGAAGATAGG CTACATCGTG GTGAAAGGCG CCGGCAAGGT TTCCGAGAAG
GCAAAGCCTC TAATCTCCGT TAAGAGCCCC GACGAGGTGG ACACGGATTA CTACGTCAAG
AGACAAATCG TGCCTGCCGC CCTGCGAATA CTAGAGTACT TTGGAGTGAA GGAAGAGCAC
TTCTCGACCG GTAGAAGGCA GGCCACGCTT TCCGACTTCT TTTAA
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| Protein sequence | MVAGEVRELE FWILDASYDV VKGHPVIYLW GITESGERIV VAEKNFRPYF YLVPENAISD
ALVERVRTAL HTFKVLSVNA IERKLFGRTL NVLKVTITDP RDVPKAREVA AKIPGIRDVL
EADIRFYMRY MVDTGISPSS WVLAKVRSAP VPNGWRVDEF FELVEAPRSL DKKSTPRLKT
YAFDIECYNR YGEPDPERDP VLVISRTGED GTVIFSQDEG SSEKKLLEEF VNDLVQYDPD
VILGYNSNRF DWPYLLQRAR VNGVKLSIGR NLGEPSQSVY GHFSVVGRAN VDLYDYASEL
QEVKVKTLEN VSEFLGVMKK SERVLIDTNK VYEYWDSKDK RSLLLRYAGD DARSTYLLGQ
VVLPFGIQLS SLVGLPLDQV FAASVGNRVE WFLIRQAFVF NELVPNSRER GEETYKGAIV
LKPKPGVHKK IAVLDFSSMY PNIMIKYNIS PDTYVPPEEH VDPSEVWVAP EVGHRFRKHP
PGFYRKVLES LLEARRRLRE KMKTLDPRSE EYRIYDERQK AIKVITNATY GYSGWSMARW
YKREVAEATT AWGRELIKAT IKKAQSLGLS IIYGDTDSIF VQFDEEKIGR LVEYVEKELG
FEIKLDKVYE KVFFTESKKK YCGLLADGRV DLVGFEAVRG DWAEISKEIQ ERVVEIVLKE
EDPWKAVDFV RKTITELSEG RIPLEKLVIW KTLSKDLDEY EVDAPHVVVA RELKRLGYRV
GKGAKIGYIV VKGAGKVSEK AKPLISVKSP DEVDTDYYVK RQIVPAALRI LEYFGVKEEH
FSTGRRQATL SDFF
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