Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpen_0236 |
Symbol | rps5p |
ID | 4600706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermofilum pendens Hrk 5 |
Kingdom | Archaea |
Replicon accession | NC_008698 |
Strand | - |
Start bp | 211531 |
End bp | 212139 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639772990 |
Product | 30S ribosomal protein S5P |
Protein accession | YP_919649 |
Protein GI | 119719154 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTGGTG AATGGCAGCC TCGAACGCTC CTGGGAAGGC TGGTGGTAGA GGGCAAGATA AAGAGCATAG ATGAGGTCTT CGCGAGAAAC ATGCCTATAC GCGAAGTGGA GATCATCGAC ACACTGCTAC CCGGATTGAA GTCTGAGGTT CTAAGCGTGG GCTTCGTGCA GAGGCAGACA GACTCGGGAG AAGTCTCACA GTACCAGGTT ACGGTCGCTG TTGGAAACGA GGACGGCTAC GTAGGAGTCG GAATGGGGAA GTCTAGGCAG ATAGGCATAG CCATCGAGAA AGCCACGAGA AGGGCAAAGC TGAACATTGT CCCCGTGAGG CGTGGTTGCG GGAGCTGGGA ATGTCTATGC GGAGAACCCC ACAGCATACC GTTCAAGGTG GAAGGCAAGG CCGGAAGCGT TAAAATCGAG CTTATACCTG CGCCTAAAGG AGTGGGCTTG GTAGCGAGCG ACGTAGCTAA AACGGTGCTA AGGCTTGCGG GCATAAAGGA CGTGTGGTCA AGGTCCTACG GCGAGACGAG GACAACGCAC AACATGGCTA AAGCCGTCTA CGAGGCGCTT AAGAAGACGT ACCAGTTTTA CTCCCCGGAT CAGTGGTGA
|
Protein sequence | MSGEWQPRTL LGRLVVEGKI KSIDEVFARN MPIREVEIID TLLPGLKSEV LSVGFVQRQT DSGEVSQYQV TVAVGNEDGY VGVGMGKSRQ IGIAIEKATR RAKLNIVPVR RGCGSWECLC GEPHSIPFKV EGKAGSVKIE LIPAPKGVGL VASDVAKTVL RLAGIKDVWS RSYGETRTTH NMAKAVYEAL KKTYQFYSPD QW
|
| |