Gene Tpen_0022 details

Gene Information

• Locus tag: Tpen_0022
• ID: 4600384
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermofilum pendens Hrk 5
• Kingdom: Archaea
• Replicon accession: NC_008698
• Strand: -
• Start bp: 17592
• End bp: 18203
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639772775
• Product: hypothetical protein
• Protein accession: YP_919435
• Protein GI: 119718940

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.556429
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCACTG GAAGTTCTAA AACCTACCTT TCCTTTCTGC TTTTTCTCTA TGTTAGCGGC 
GGCTACGTAA GCAGGAAGAC GCTGTCGAGC GAGCTCGGGC TCGGGGAGGG CGTGGTCAGG 
TCCCACCTAA GGTTTCTCAA CGAGAGGGGG CTTGTGCGCT CAGTGCGGGC GGGGAACGCT 
CTCACGGATA GCGGGAGGAA CGGCGTGCGC GGATTGCTTG AGGCGATGTC CGCTAAGAGG 
CTCGGGCTTG CCCCTGCGTG GGAGCTTAAC GCGCGGGAAG CTGTATACGT GCTCCTGCAC 
GGGTACCCGC CCGCTGAAAA CGTTGTGAAG TTGAGGGATG AGGCGGTTAG GGAGGGCGCA 
GACGGCGCGG TGATAGCCGT GTTCGACGGG GGAAAGTTCA GGTTGCCGCC GGGAGGCGAG 
GATCTCTGCT CGTACGCCCC GAGGCTCTGC GGGGAGGTCC TCGGAGAAGC CGAGGAGGAG 
GACTGTCTGC TCGTAGTCTT CGGAGAGAGG CTCGGAGCTG CGGTGAAGGG CCTCGTCGGG 
ATCTTACTCA GCGAAAAAGC CCCTTGGAGA CCCAGTCTTC TAGAATCCCT GGAACTTCTC 
CTACGGAGTT GA 

 

Protein sequence

MSTGSSKTYL SFLLFLYVSG GYVSRKTLSS ELGLGEGVVR SHLRFLNERG LVRSVRAGNA 
LTDSGRNGVR GLLEAMSAKR LGLAPAWELN AREAVYVLLH GYPPAENVVK LRDEAVREGA 
DGAVIAVFDG GKFRLPPGGE DLCSYAPRLC GEVLGEAEEE DCLLVVFGER LGAAVKGLVG 
ILLSEKAPWR PSLLESLELL LRS