Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_4290 |
Symbol | |
ID | 9158477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014159 |
Strand | - |
Start bp | 45265 |
End bp | 46644 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | Orn/DAP/Arg decarboxylase 2 |
Protein accession | YP_003649195 |
Protein GI | 296141953 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.61093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGAGA ACTCCGTTTC AGCTAACGCC CAGCTGCGCT TCCGCGCGCA CGGTGAACCC GCAGTCCCTG GGCGTCTCGT GCGATGGCAG GTCGACCTGC TTCGCGATTG GGCAACCCTG CACCAGCTGA TCGAAGAGCA CGGCTCACCG GTGAACGTCA TCAACCCGGC TCCGCTCGCC GGGCACGCCG GAGAGCTCAT TGCAGCGGCG CAGGAAGCGC GGGTCGACCT GCGGGTGTAC TTCGCTCGCA AGGCGAACAA GGCACTGGCC CTTGTCGAGG CTGCTCTCGC TGCCGGGCAC GGCATCGACG TCGCTTCTGA GCAGGAACTG CGACAAGTAT TGGCCTTCAA TCCTCAGCCT GACCGGATCA TCCTGACCGC CGCTGTCAAA CCCAATGCGC TACTAAAGCT GGCTGTGAAC TCCGGCGTTG TGATCTCTAT CGATAACGGC GACGAGCTCG CTGCGCTGGT CCGAGTCATC GCAGAGTGCA AGCACCGGGA AGACGTTCCG GTGGCCCTCC GGATCGCAGC GGAGCTTCCC GGCGCCGCCC CCAGTCGGTT CGGGATGGCC CAGGAGCAGA TCCGCGAGAT CTTAAACAAC TTCCCAGGCC AACTCGCCCT GTCTGGGTTC CATTTTCATT TGCACGGCTA TAGTGCCGAG CATCGAAGCG AGGCTCTCGC ACAGGCGCTC GACCTGATAG CCACTGCCCG CCATCAGCAA CACCGGCCCA CCTTCATCGA CATCGGGGGC GGCATTCCCA TGCGCTACCT CGACACACCG GCTACCTGGG ATGCGTATCA GCAGTCCACC AAATCTAGTG ATCTGTCCGC CTTTTGGGCA GCCAAGGCGC CCGAGAACGT CTATCCCATG TGGCAGGAGC TAGTGCGAGG CGCCTGGCTC GCATCAGTTC TAAGCGCACC AGGCCTCGCA CAGCGCATCG CCGACGCCGG CATCCGCCTC CACGCCGAAC CTGGACGCTG CCTCCTTGAC GGGTGCGGCC TCACTGTGGC GAGAGTCGAG TTCCGCAAAC AACGATCCGA CGGCACTTGG CTGATCGGAC TAGCCATGAA CAGAACCCAG CTACGCTCCG CCGCCGACGA CTTCATCCTC GACCCAATCT TGATCCCAGC ACCGGAGCGC GCACCCACGC CACCCATCTC CGGATTCCTC GTCGGGGCCT ACTGCATCGA AGCCGAGCTG ATCACACGCC GCAGAATCAC CTTCCCCGAA GGCGTAGCCG TGGGCGACCT GATCGCCTTC ACCAACACTG CCGGATACCT GATGCATATC CTCGAAAGCG CATCACATCA AATACCACTG GCACATAACA TCGTCCTGAA AGAGGGCAGA TGGCGAAGGG ACCAGATTGA TCAACCGTGA
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Protein sequence | MPENSVSANA QLRFRAHGEP AVPGRLVRWQ VDLLRDWATL HQLIEEHGSP VNVINPAPLA GHAGELIAAA QEARVDLRVY FARKANKALA LVEAALAAGH GIDVASEQEL RQVLAFNPQP DRIILTAAVK PNALLKLAVN SGVVISIDNG DELAALVRVI AECKHREDVP VALRIAAELP GAAPSRFGMA QEQIREILNN FPGQLALSGF HFHLHGYSAE HRSEALAQAL DLIATARHQQ HRPTFIDIGG GIPMRYLDTP ATWDAYQQST KSSDLSAFWA AKAPENVYPM WQELVRGAWL ASVLSAPGLA QRIADAGIRL HAEPGRCLLD GCGLTVARVE FRKQRSDGTW LIGLAMNRTQ LRSAADDFIL DPILIPAPER APTPPISGFL VGAYCIEAEL ITRRRITFPE GVAVGDLIAF TNTAGYLMHI LESASHQIPL AHNIVLKEGR WRRDQIDQP
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