| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_4028 |
|---|
| Symbol | |
|---|
| ID | 9158212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 4156342 |
|---|
| End bp | 4157199 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF81 |
|---|
| Protein accession | YP_003648938 |
|---|
| Protein GI | 296141695 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.957428 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAGG CAGCAGCCCC CGCCGCGACC GGATCGTCGG TCAGCGGTCC GCAGATCCCC
GGCCCGCGCC GGTCGGCCTC GATCGGGTTC CTCGGCGGCA TCTCGGGCGG TCTGCTCGGG
GGTGGCACCG GCGTGGTGAC GGTGCCGGCC CTCGATCGGC ACTCGACGTT GCCGCGGCAC
GTCATCCACG GCACGTCGAC CCTGGCGAAC GTCTCCGCGG CACTGGTCGG GTCGATCGTC
TACGCCCTCC GCGGCGGCCA TGTCGACATC GTTCCCGGAA TCGGCCTGAT GATCGGTGGC
GTGGTCGGCG CCTATGTGGG CGCCCGCTGG GTATCCAAAG TCCCCGAGGC GGTGCTGCGC
TCACTGTTCG TGCTGGTGCT CACCCTGTCG GCGACGAAGT TCTTGTTGCA GGCCTTCGGC
ATCCAGGTCG GCTCCTCGTC GGGCTTGTTC GAGGGCACCG CGCTGATCGT GGCGGTGGCC
ACGGTGACCG GCCTGATCGT GGGCGCCTAC TCCGCGGCGA TGGGCCTCGG CGGAGGTCTG
CTCGTGGTGC CGGTGATGGC CGTCCTGTTC GGTGCCAACC TGCACACGGC GGCAGGAACC
TCGCTGTTGG TGATGCTGCC CAATGCCATC GTCGGCGCAG TGACCCACAT CCGGCACGGC
AGCGCCGACC TGCGCGTGGG CAAGCCACTC GCTCTCGCCG CGCTGCCCGG ATCGCTCGTG
GGCGTCAGCC TTGCGCTCGC CCTTCCGGAG AGAGGGCTCG CGGCTGTGTT GGGAACGTTC
ATGGCCTTCC TCGCGGTGCG CGAGGTGCTC CGGTGGCGCC GGACGGTGCG TGCGGCGCGT
GCCGAACATG CAGGTTGA
|
|---|
| Protein sequence | MTQAAAPAAT GSSVSGPQIP GPRRSASIGF LGGISGGLLG GGTGVVTVPA LDRHSTLPRH
VIHGTSTLAN VSAALVGSIV YALRGGHVDI VPGIGLMIGG VVGAYVGARW VSKVPEAVLR
SLFVLVLTLS ATKFLLQAFG IQVGSSSGLF EGTALIVAVA TVTGLIVGAY SAAMGLGGGL
LVVPVMAVLF GANLHTAAGT SLLVMLPNAI VGAVTHIRHG SADLRVGKPL ALAALPGSLV
GVSLALALPE RGLAAVLGTF MAFLAVREVL RWRRTVRAAR AEHAG
|
|---|
| |