Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3999 |
Symbol | |
ID | 9158181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 4129722 |
End bp | 4130657 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | transcriptional regulator, LysR family |
Protein accession | YP_003648909 |
Protein GI | 296141666 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGTCC ACCGCCTGCG GATCCTGCGC GAACTCGCCG ATCGTGGCAC CGTCGCGGCC ACCGCGCGAG CGCTGGATAT GACGCCGTCT GCGGTCTCGC AGCAGCTCAA GGTGCTGGCC CGGGAGGCAG GCGTCGACTT GCTGGAACCC GACGGCCGGC GGGTACGCCT GACCGATGCG GGGCTCGCTC TGGTGGTGCG GGCCGAATCC GTGCTCGGCG AACTCGAACG TGCTCGCGCC GAGATGGACC GCTACCGCTC CACGCCCACC GGTGTCGTGC GCCTGACCCT GTTCCCGTCG GCGGCCGAAC TGCTGCTCCC CGGCGTGCTG CGCCGCACCA CCGGGGCGGG CGTGCAGGTG ACCGCCGCCG ACGCCGACCT CCCCGGCACC GAGTTGCCCG CGATGCTGGC GGACGCCGAT GTCGTGGTGG CGCACCGCGA CGAGCGCGCC CCCGCGCTGG GCGGTCCCCG CATCGCCTCC CGCGTTCTCA TGCGCGAGCC GATCGACCTC GTCGTGCCGA TGGACCATCC GCTCGCGGCG GCTGGGCGCG TCGCCGCGGA ACAGCTCAAA GATCTCGACT GGATCAGTGT GCGCGACGGC TTCCCGGTCG ACGACGTGTT GCGCTCCTTG GCGACGATCA CCGGTGTGCA GCCGCGGATC GTGCAGCGGA TCAACGATTT CCACACCATT CAGGCGATGG TCGCGGCGGG TCTCGGAGTA GCCCTTGTGG CCCGGCATGC GGTCACCCAT CCCGGCGTGC GCGGATTGGA GATCGCGGGC GTTCTCGCCG CCCGCATCCT CGAGGTGGCG ACCCGGCCGG GTGCCGAGCG GCGACCCGCG GTGGCCGCCG TGCTCCGTGC GCTCGATGAC GAGGTGGCAG CGGTCCATGC GGACGGTGCT GGCATCAGGC AGATTCCAAC GCTCGACTGG ACCTGA
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Protein sequence | MDVHRLRILR ELADRGTVAA TARALDMTPS AVSQQLKVLA REAGVDLLEP DGRRVRLTDA GLALVVRAES VLGELERARA EMDRYRSTPT GVVRLTLFPS AAELLLPGVL RRTTGAGVQV TAADADLPGT ELPAMLADAD VVVAHRDERA PALGGPRIAS RVLMREPIDL VVPMDHPLAA AGRVAAEQLK DLDWISVRDG FPVDDVLRSL ATITGVQPRI VQRINDFHTI QAMVAAGLGV ALVARHAVTH PGVRGLEIAG VLAARILEVA TRPGAERRPA VAAVLRALDD EVAAVHADGA GIRQIPTLDW T
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