Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3950 |
Symbol | |
ID | 9158131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 4069796 |
End bp | 4070671 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Transketolase domain protein |
Protein accession | YP_003648861 |
Protein GI | 296141618 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.804929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCCTC CGAAACAGAC ACCTGAGTGT GAGTCCGTCC GGACCCGCCT CGAAGACCGA GCCAAGTTCG TGCGCCTCGA GACCGTGCGG CTGTCCCGGA TCGCCGGCGC CGGCCACTAC ACCTCGTCCT TCTCGGCGGC AGAACTGTTC GCGGCGCTCT ACTACTCGGT GATGAACTAC CTTGCCGCGG AGCCGAAGTG GGCCGACCGC GACCGATTCG TGCTGAGCAA GGGGCATGCG GCGATCGGCC TGTACCCGGT GCTCGCCGAC GTCGGCTTCT TCCCCGAGTC CGCGCTCGAC GACTACACCC GGCTGGGCAG CCCGTTCGGC GACCACCCCG ACATGAAGAA GATCCCGGGC ATCGACTTCA GCTCAGGCTC CCTCGGCCAC GGCCTGTCGA TCGCCGTCGG GATGGCCCTC GCTGGCCGCG TCGGGGCACG CCCGTACCGC ACGTTCTGCA TGCTGGGCGA CGGTGAGCTG CACGAGGGCC AGGTCTGGGA AGCGGCGAAT GCGGCTGGCC ACTACCGGCT CGGCAAGCTG GTGGCCATCG TCGACCGCAA TCGGTTGTGC ATCGACGGTT TCACCGACGA CGTCATGAGT GTCGAGCCCA TCGAGGACCG GTTCGCCGCG TTCGGCTGGC AGGCGCACCG TGTCGATGGG CACGACGTGG GAGCCCTGCT GGACCTATTC GACGCGCTGC CCGACGACCC CGACGGGCCA CCCCAGGTGA TCGTGGCCGA CACCGTCAAG GGACGTGGCG TGAAACTCAT GGAATACAAC CCCGATTGGC ACGTCGGCAA TCTGGTCGGC ACCGACTACG ACGATGTGAT CGCGGAGCTG CAGGCCGGAC TGCGCCCGCT GGAGGTGGTG AAATGA
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Protein sequence | MIPPKQTPEC ESVRTRLEDR AKFVRLETVR LSRIAGAGHY TSSFSAAELF AALYYSVMNY LAAEPKWADR DRFVLSKGHA AIGLYPVLAD VGFFPESALD DYTRLGSPFG DHPDMKKIPG IDFSSGSLGH GLSIAVGMAL AGRVGARPYR TFCMLGDGEL HEGQVWEAAN AAGHYRLGKL VAIVDRNRLC IDGFTDDVMS VEPIEDRFAA FGWQAHRVDG HDVGALLDLF DALPDDPDGP PQVIVADTVK GRGVKLMEYN PDWHVGNLVG TDYDDVIAEL QAGLRPLEVV K
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