Gene Tpau_3938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3938 
Symbol 
ID9158119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp4058372 
End bp4058683 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscription factor WhiB 
Protein accessionYP_003648849 
Protein GI296141606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.593836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGAACG CACGGGTACT CGTAGACGAC GAGGATCGTC TGGTCTGGGT GTCCAAGGCC 
AAGTGCCGCG ATGTCGATCC GGATGAGCTC TTCGTCCGCG GCGCCGCACA GCGCAAGGTA
GCGACGATCT GTCGGCACTG TCCCGTGCAG CTCGAGTGCG GCGCCGACGC ACTCGATAGC
CGCGTCGAGT TCGGCGTCTG GGGTGGGATG ACTGAGCGTC AGCGCCGCGC CCTTCTTCGC
CAACACCCCG AGGTCACCAG CTGGCGCGCC TTCTTCGAGG CGCAGCGGGA CCGCAAGCGC
ACCGCGGTCT GA
 
Protein sequence
MTNARVLVDD EDRLVWVSKA KCRDVDPDEL FVRGAAQRKV ATICRHCPVQ LECGADALDS 
RVEFGVWGGM TERQRRALLR QHPEVTSWRA FFEAQRDRKR TAV