| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3867 |
|---|
| Symbol | |
|---|
| ID | 9158048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3988744 |
|---|
| End bp | 3989538 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | aminoglycoside phosphotransferase |
|---|
| Protein accession | YP_003648781 |
|---|
| Protein GI | 296141538 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.499671 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGGGC ACGACGAGCC CTTGGTCGGC GGGAACAGCG CAGCTCACGT CATCCGGCGC
GGCGACACGG TGCGCAAACC GTGGACGGAC AGCACGCCAT CAGTGGTTCG GTACCTCCGT
GCGCTGTCCA CGAACGGTGT GACGGTACCG CGACACCTCG GACGCGACAG TGCGGGCCGG
CAGAGGATCG CCTACGTACC GGGTCGGCTC GCGCACCATC ACCGGACGTT GTCCGATCAC
CGACTGATCG ATGTCGGACG AGCGATTCGC CGCATCCACG ATGCCAGCGA ATCGATCCCC
TTCAATAACG ACCACTGGGA TGTGCTCATT CCCTCCCCGG CACCGTCGAC CCTGTTGTGC
CACAACGACA TAGCTCCGTG GAACTTGGTG ATCAATGGGA ATGTTCTGAG CTTCATCGAT
TGGGACGGAG CCGGACCGAG CACCCGGACC TGGGATCTCG CCTATGCCGC TCAATCTTTC
GCTCGAATGG ACCCGTCCTC GCCGCCGGTC GCAGCCGCCC AGCGACTGCG GTCACTGCTG
CTCGGCTACC AGCCCGACGC CGCGATGAGC CGAGAACTAC CGGACGTCAT CGCACACCGG
ACCCGCGCGA TGTTCGACAC CCTGCGCGAC GCATCGCATA CGCGTCGAGA ACCGTGGGCC
GGCATGTTCG CATCAGGTCA CGGCGAATAC TGGTCCGCCG CCGCCGACTA CGTCGAGCAG
CACGCCGCAG TCTGGGCGGA GGCGATCGCG TACGGCCATT CGACGGCCCG CAATTCGACG
GGAAGAACCA CCTGA
|
|---|
| Protein sequence | MDGHDEPLVG GNSAAHVIRR GDTVRKPWTD STPSVVRYLR ALSTNGVTVP RHLGRDSAGR
QRIAYVPGRL AHHHRTLSDH RLIDVGRAIR RIHDASESIP FNNDHWDVLI PSPAPSTLLC
HNDIAPWNLV INGNVLSFID WDGAGPSTRT WDLAYAAQSF ARMDPSSPPV AAAQRLRSLL
LGYQPDAAMS RELPDVIAHR TRAMFDTLRD ASHTRREPWA GMFASGHGEY WSAAADYVEQ
HAAVWAEAIA YGHSTARNST GRTT
|
|---|
| |