Gene Tpau_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3833 
Symbol 
ID9158013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3956660 
End bp3957274 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content63% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003648747 
Protein GI296141504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTAGGC CGGACGCCTC GACTCGTCGC GCGGAACTCC TCGCGGTGTG TGCTCGGCTG 
TTCGCCGAGA ACGGCTATCG CGCGACCACG GTCCGCGATA TCGCTGATGC GGCCGGCATC 
CTCTCGGGTA GCCTCTACCA CCATTTCGAT TCGAAGGAAT CGATGGTCGA CGACATCCTG 
CGCGATTTCT TGGATCGACT GTTCACTCGT TACCGCGCGG TGCTCGACTC CGGCTCGAGT 
CCGCGGGACC AGCTGCGCGG ATGCGTGATC GCATCTTTCG ACGCCATCGA CGCGGATCCC 
GAGGCAGTGG CCATCTATCA GGCCGAGGCG CGGTCGCTCG CACACGTCGA GCGGTTCGCC 
TACATCGCTG ATCGGCTTGA GGAGTTCCGG GCCATGTGGC GCGATATTCT CACTCGCGGA 
GTCGAATCCG GAGACTTTCG CAACGATCTC GATATCGACG TCACGTACCG GTTTCTGCGC 
GACACGGTCT GGGTAGCGGT GCGGTGGTAT CGCCCCGGTG GGGCGCTGAC CTCCGATGCT 
GTCGCCGCCC AGTACCTCGG CATCCTCGAA CGGGGCATCG CCGGTCCGAA CGAATCCACA 
AGGGAGAAAA CATGA
 
Protein sequence
MPRPDASTRR AELLAVCARL FAENGYRATT VRDIADAAGI LSGSLYHHFD SKESMVDDIL 
RDFLDRLFTR YRAVLDSGSS PRDQLRGCVI ASFDAIDADP EAVAIYQAEA RSLAHVERFA 
YIADRLEEFR AMWRDILTRG VESGDFRNDL DIDVTYRFLR DTVWVAVRWY RPGGALTSDA 
VAAQYLGILE RGIAGPNEST REKT