Gene Tpau_3648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3648 
Symbol 
ID9157828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp3761461 
End bp3761979 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content62% 
IMG OID 
ProductProtein of unknown function DUF2505 
Protein accessionYP_003648565 
Protein GI296141322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAC GTCTCAGCTA TTCGGCGCGC TTCCCGTTCC CCGCCGAGGT CTTCTACAAC 
GCGTACTCGT CCAAGGAGTA CTGGGACGAG AAGATGACGG ACTTCCGGAA CCTGACCCCG
CTCTCGGAGA TCTCCGAGTT CGACGTGGAC GACGTGGACG ACGAGGGGAT CACCGTCGTC
CAGAAGCAGA ACCTGCCGCA CGAGTACCTG CCGCCGATCG CGCAGGGCGT GGTGAAGAAG
GACATGATCA TCACGCGCCA GGAGTTCTAC GGCGCATGGG ACGGCGAGCA CTCGCTCGGC
GACTACAAGG CGTCGATCCC CGCGGGCCCC GGGTCCCTCA AGGGGGAGTG CGACCTGTTC
AACACCGAGA CCGGCTGCAC CATGCGGTAC ACCACGGTGG TGAAGGTGTT CGTGCCCTTC
GTGGGCACCA AGTTGGAGCA ACTGATCCTG ATCAACCTGG TGGACCTGTT CCGCGCCGAG
GCCGAGTACC TCAAGTACTG GGTCGATAAG AACAACTGA
 
Protein sequence
MARRLSYSAR FPFPAEVFYN AYSSKEYWDE KMTDFRNLTP LSEISEFDVD DVDDEGITVV 
QKQNLPHEYL PPIAQGVVKK DMIITRQEFY GAWDGEHSLG DYKASIPAGP GSLKGECDLF
NTETGCTMRY TTVVKVFVPF VGTKLEQLIL INLVDLFRAE AEYLKYWVDK NN