Gene Tpau_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3625 
Symbol 
ID9157804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp3740932 
End bp3741543 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003648542 
Protein GI296141299 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.679664 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAGG TGACAGCCGC GACCACACCC AAGGGCGAGC GCCGGCGCGC GGCTCTGGTG 
GCCGCGGCCG GTGAGCTACT CGTGGAAGGC GGCTTCGAAT CGGTGCGTCA TCGCGCCGTC 
GCCCACCGCG CGCACATCCC GCTGGCGGCC ACCACCTACT ACTTCGAGTC ACTCGGCGAT 
CTGCTGTCGA ATGCCGTGGC GTACGCGGGC GATCACGACA TCGCAGCCGT CCGGGCACGG 
GTCGACGGCG TCAGTCGTCG GCGCCGCGGC GATGCCGCCC TTGCCCGGCT GATCGCGACC 
GTCTTCTTCG CCTGCGAGAG CGAGGCGGAG CGCAGCGCCC TCGTGTCGCG GTACGAGCGG 
CTCGTGGTGT GCACCCGTGA CCCGCACCTC GCGCAGATGC AGGCGCAGGT GCGAGGCACG 
CTCGCCGAAC TGCACGTCGA GGTCCTCGAT CGGTCCGGGC GCCGCACCGA TCGGGCACGC 
ATCGAACGGT TGATGGCGAT CGAGGACGGC GCCGCACTGG CTGCGTTCAC CGATCACGGC 
ACTGATGTGG CCCGCGCCGT TCGCGACGCC GTGGCCGCCG TGATCGATGA TCTGGCGGCC 
CCGCTTCCGT GA
 
Protein sequence
MSKVTAATTP KGERRRAALV AAAGELLVEG GFESVRHRAV AHRAHIPLAA TTYYFESLGD 
LLSNAVAYAG DHDIAAVRAR VDGVSRRRRG DAALARLIAT VFFACESEAE RSALVSRYER 
LVVCTRDPHL AQMQAQVRGT LAELHVEVLD RSGRRTDRAR IERLMAIEDG AALAAFTDHG 
TDVARAVRDA VAAVIDDLAA PLP