Gene Tpau_3545 details

Gene Information

• Locus tag: Tpau_3545
• ID: 9157724
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: -
• Start bp: 3656933
• End bp: 3657664
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 70%
• Product: putative two component transcriptional regulator, winged helix family
• Protein accession: YP_003648463
• Protein GI: 296141220

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.61486
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGATCTCA TCCTGCTCAC GTCCGACCCG AATCCGGACG GAGTGTTACC CGCGCTGTCG 
CTGCTCGCGC ACACCGTGCG CCCGCTGGCC GCAGACGTCT CCTCGCTGCT CGAGGTGGGT 
CCGGCCGACG TCGCGCTGGT CGATGCCCGC ACCGATCTGG TGGCGGCCCG CGGTCTGTGC 
CGGCTGCTCG GCACCACCGG TGGCGGACAG ATCCCGGTGG TCGCGGTGCT CACCGAGGGC 
GGTCTGGTGG CGGCGAACGC CGACTGGGGT CTCGACGACT TCCTCCTTCC GGCCACCGGC 
CCCGCGGAGA TCGACGCGCG CCTGCGGCTG GTCGCCGGGC GGCGCATCGG CGGCGCCGAG 
GACGAGGTGG CCGACAAGAT CACGCTCGGC GAACTGCTCA TCGACGAGGG CACCTACACC 
GCGAGGCTGC GCGGCAAGCC GCTCGACCTG ACCTACAAGG AGTTCGAACT CCTGAAGTTC 
CTCGCGCAGA ACGTGGGCCG CGTGTTCACC CGCGCCCAAT TGCTGCAGGA GGTGTGGGGC 
TATGACTTCT TCGGCGGCAC CCGCACCGTC GATGTGCACG TGCGGCGCCT GCGCGCCAAG 
CTCGGCGCCG AGCACGAGGG CATGATCGGC ACGGTTCGTA ACGTGGGCTA CAAGGCCGTG 
CGGCCCGCCC GTGGAAAGAA CGACCGCGGC GATGACACCG GCGAGGAGTA CGAGGAAGCC 
GAGGAGGCCT GA 

 

Protein sequence

MDLILLTSDP NPDGVLPALS LLAHTVRPLA ADVSSLLEVG PADVALVDAR TDLVAARGLC 
RLLGTTGGGQ IPVVAVLTEG GLVAANADWG LDDFLLPATG PAEIDARLRL VAGRRIGGAE 
DEVADKITLG ELLIDEGTYT ARLRGKPLDL TYKEFELLKF LAQNVGRVFT RAQLLQEVWG 
YDFFGGTRTV DVHVRRLRAK LGAEHEGMIG TVRNVGYKAV RPARGKNDRG DDTGEEYEEA 
EEA