Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3462 |
Symbol | |
ID | 9157637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3543224 |
End bp | 3543889 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | regulatory protein TetR |
Protein accession | YP_003648382 |
Protein GI | 296141139 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0249959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTGCCCA TGGCCGGATC GGTGCGCCGG AGCGAGGCGC TGACCAAGGA CGCGATCGTG ACGGCGGCGA TCGAGATCCT CGACCGCGAG GGCGAGACCG GGCTCACGTT CCGAGCGCTC GCCACCCGGC TGGAGACCGG CGCCGGCGCG CTGTATCACC ATGTGGCGGG CAAGGACGAG TTGCTGGCCG CCGCGGCGGA CCGGGTGATC GGCGCCGTCC TCGCCGAGGC GTCGGACCGG GACGATCCCG CAGCGGAAAT CCGGGGATTG GCCCTCGGTC TCTTCGACGC CGTGGACGAG CACCCGTGGG TGGGGGCGAG CATGTACCGG GACCCGGCAC AGAACGGTGC GCTGCGCGTC TTCGAGGCGC TCGGCAGCCG GATCGTGCGG CTCGGGCTGC CCGACGGTGC GCGGTTCGAC GCCGCGACCG CCCTCCTCAA TTACATCGTG GGGGCGGGCG TGCAGAACGC CGCGAATGCG CGTGCGTCCG TGGGTGGTCC GAGGCGGGAG GAGCATCTGG GCGCGATGGC GGACCGCTGG GACGCGTTGG ACCCCGCCGA GTTCGCCTTC ACCCGCAGTG TGGCCGCACG GCTGCGTGAG CACGACGACC GGGAACAGTT CGTGGCCGGG GTGGATCTGA TCCTGGCCGG CGTGCGCGCA AGCTGA
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Protein sequence | MVPMAGSVRR SEALTKDAIV TAAIEILDRE GETGLTFRAL ATRLETGAGA LYHHVAGKDE LLAAAADRVI GAVLAEASDR DDPAAEIRGL ALGLFDAVDE HPWVGASMYR DPAQNGALRV FEALGSRIVR LGLPDGARFD AATALLNYIV GAGVQNAANA RASVGGPRRE EHLGAMADRW DALDPAEFAF TRSVAARLRE HDDREQFVAG VDLILAGVRA S
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