Gene Tpau_3387 details

Gene Information

• Locus tag: Tpau_3387
• ID: 9157562
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3481290
• End bp: 3482012
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 72%
• Product: hypothetical protein
• Protein accession: YP_003648310
• Protein GI: 296141067

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGTTCT CCGTCGCCCG GCGCCTCGGC GTCGTGGCCG CCGCTTCCCT CGGTGCCGCC 
ACATCCGTGC TGATCGCCGC CGGCCCCGTC GCCGCCGCCC CGAACATCGT GATCGGCCCC 
GGCTCCGAGA TCGACGTGGT GCAGAAGGAG ACCGACAAGG GCATCGAGGT GCAGGCGTGC 
ACGCTCGGCG TCATGGCCCT CACTCCGGAC GGCCGCCGCG TCGGCGTGAC CGCCGGACAC 
TGCGGCAACG CCGGCCAGAC CGTCGCCGTT CCGGTGCCCG GCCGCGATCG CACCATCGCC 
GACGTCGGCA AGGTCGAAAG GTCGGCGTCC CCGCGGATCT CCGACGACGA CCGCGTCATC 
GACCCGAACG AGCCCGACTG GGCCACCCTG GCGTTCAAGC CGGGCGTGCC GCTGACCAAC 
CGGCAGGGCA CCGTCAACCC GCGCATCGTC GGCCGCGCCG TGGTAGGCGA TCAGGTGTGC 
CGGCAGGGCC GGACCACCGG CTGGCAGTGC GGCAGGGTGA TCGACGTGGC CGGCAACCGC 
ATCCTGTCGG ATGTGCGCAG CGATCACGGC GACAGCGGCG GGCCGCTGAT CCGGATGGCC 
GACGGTGCCG TGCTCGGCAT CGCGACCAGC TCGTTCAAGG ACGGCAGCTC GGCCGGCCAG 
TCCCAGTACT TGGATCTCGG CTTCATCTTC GGCGCGGCCG GCGGCCTGCG CCTCGCGGTC 
TGA 

 

Protein sequence

MQFSVARRLG VVAAASLGAA TSVLIAAGPV AAAPNIVIGP GSEIDVVQKE TDKGIEVQAC 
TLGVMALTPD GRRVGVTAGH CGNAGQTVAV PVPGRDRTIA DVGKVERSAS PRISDDDRVI 
DPNEPDWATL AFKPGVPLTN RQGTVNPRIV GRAVVGDQVC RQGRTTGWQC GRVIDVAGNR 
ILSDVRSDHG DSGGPLIRMA DGAVLGIATS SFKDGSSAGQ SQYLDLGFIF GAAGGLRLAV