| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3309 |
|---|
| Symbol | |
|---|
| ID | 9157483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3402085 |
|---|
| End bp | 3403341 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003648233 |
|---|
| Protein GI | 296140990 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTGGACT CATTGCTCGC CGCCGACGAT AGTCGATGCG TGACCACGTC AACCGCCGAA
GCGCCCAGCG CCACCACGTC CGGTCTGCTG CGCCTGATGG CCCTCGCGAC CGGATTGTCC
GTCGCCGGCA ATTACCTCGC TCACCCGATC CTCGGCCTCC TTCAAGAGCG GCTCGACATG
TCCGAGACCG CCGCCGGGCT GCTGGTGACC GCCGCACAGG CCGGCTACGC GGTCGGGCTG
GTGCTGTTGG TGCCGATGGC CGATGCGGTG CGCCGCCGCC CCCTCGCGCT CACGCTGTTG
GTGATCACCG CAGCCGCCCT GGTGGCCGCG GGTGCGGCAC CGTCGGGCAC GGTCCTGTTG
GTGGCGGCCA CCGCCGCCGC GATCACCTCA GTGGGCGCGC AGGTGATCGT TCCCTACGCG
GCGGAGCTCG CCGGGCCGGA GCATCAGGCA CGTGCCGTGG GAATCGTGAT GAGTGGCCTG
GTCCTGGGTA CGGTCGTGAG CCGGTTCCTC TCGGGTGTGC TGTCCGATCT CGCGGGCTGG
CGCACCCCGT ATCTCGTCCT CGCGGGCTTG ATCGTGCTGG TGACCGTGGC ACTCGCCCGG
GCGCTCCCCC GGCACGATCC GGGGCGGCCC GGACTCACGG CGGCCGGATA CCGCGCGTTG
CTGTCGTCGA TGGCCGGGTT GATCCGCGAT CTTCCGGTGC TCCGGCTGCG GGCGGTGCTG
ATCGGCCTGG CGCTGGGGTC GTTCATGGTG CAGGGCGCTG CCGTGACGTT CCTGCTCTCG
GGTTCCCGGT TCGGCTGGAC GCCGGCGGCG ATCGGCGCGA TCGGTCTCTT GGGCGCGGTC
GGCGCACTGT CGGGGCCCAC GATCGGACGC TTCGTCGATC GGGGGCACGG TCCGCGGATC
ACCGCGGGTG GACTGGCACT GCAGGCGATC GCGTGGCTGC TGATGATCCC GGCCGGTGGG
GTGATCGGGC TACCGGCGCT GATCGCCGGT CTGGTCCTGA TGGGTATCGG CCAGCAGGCC
GCACTGAATT CGTCTCAGGC GGTGGTCTTC TCACTGCGAC CGGAGGCACG AGGACGGATC
AACGCCGTGT TCATGGGCAC GTTCTTCCTC GGTGGCACGC TGGGTTCCGC TGCGACGGCC
GCGCTATGGC CACTCGCGGG CTGGACCGGC GCATGCCTGC TCGGTTCGGG ACTCGCCGGC
GCCGCCCTCG TGCTCTACCT GGCGTTCCGG AGGGTCGAAA CCGCACCGTC GGCCTAG
|
|---|
| Protein sequence | MLDSLLAADD SRCVTTSTAE APSATTSGLL RLMALATGLS VAGNYLAHPI LGLLQERLDM
SETAAGLLVT AAQAGYAVGL VLLVPMADAV RRRPLALTLL VITAAALVAA GAAPSGTVLL
VAATAAAITS VGAQVIVPYA AELAGPEHQA RAVGIVMSGL VLGTVVSRFL SGVLSDLAGW
RTPYLVLAGL IVLVTVALAR ALPRHDPGRP GLTAAGYRAL LSSMAGLIRD LPVLRLRAVL
IGLALGSFMV QGAAVTFLLS GSRFGWTPAA IGAIGLLGAV GALSGPTIGR FVDRGHGPRI
TAGGLALQAI AWLLMIPAGG VIGLPALIAG LVLMGIGQQA ALNSSQAVVF SLRPEARGRI
NAVFMGTFFL GGTLGSAATA ALWPLAGWTG ACLLGSGLAG AALVLYLAFR RVETAPSA
|
|---|
| |