Gene Tpau_3274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_3274 
Symbol 
ID9157448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp3372816 
End bp3373472 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content73% 
IMG OID 
ProductSAF domain protein 
Protein accessionYP_003648198 
Protein GI296140955 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.785006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTCAC TGCAACCGAC GGGCGCAGAA CGCATCCGCG CTGCGCTGCG CCCCGGCTGG 
GCGCGCACCC TCACCGCACG CCGGGCCGCG GCCGGGGTGC TCACCGTGCT CGCACTGGTG 
GTCGCCGTCA CCAGCGAGCC GAGTGGGCCG CAGACAGAGG TGCTCACGGC GGCAAGGGAA 
CTCGGCCCCG GCGGCAGGCT CGCCGATGCG GACCTACGGC TGACCACGGT CCCGGCCGAG 
TTGGCTCCAC CGGATGCGCT CACCTCCACC GGGCAGGCGG TGGGCCGATC GGTGACCGGG 
CCGGTGGGGG CGGGCGAGAT CCTGACCGAC CGCCGGGTCC TCACCGATCG CACCGCCGGT 
CAGATCCGGC CCGGATCGAG GCTCGTGCCA GTAGCGCTAC AGGATGCGGC GACGATGGAC 
CTGCTACGCC CCGGCGATGT GGTCGATGTG GTGGCGCAGC GTAAGGCACG CGCCGGCGAG 
CGGGAGGACG ACGGTACGCC GCTCGTCCTC GCTCGCTCGG CGACGGTGGC GGTCGCGGCA 
GCGGCGCAGG GACCGCGTCA GCAGGCGCGC ACCGCGATGC TGGCGATGAC CGAGACCGAG 
GCGCACGCGG TTGCCGCAGC GGCGCTCAGT TCGCCTCTAT CGGTGGTTTT CCGATGA
 
Protein sequence
MNSLQPTGAE RIRAALRPGW ARTLTARRAA AGVLTVLALV VAVTSEPSGP QTEVLTAARE 
LGPGGRLADA DLRLTTVPAE LAPPDALTST GQAVGRSVTG PVGAGEILTD RRVLTDRTAG 
QIRPGSRLVP VALQDAATMD LLRPGDVVDV VAQRKARAGE REDDGTPLVL ARSATVAVAA 
AAQGPRQQAR TAMLAMTETE AHAVAAAALS SPLSVVFR