Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3259 |
Symbol | |
ID | 9157432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 3360778 |
End bp | 3361722 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003648183 |
Protein GI | 296140940 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCAGC CGCCGAACAA CCCCGGTGAC AATCAGGGCG GCTTCCCGCC GCCGCAGGAT CCCCAGCAGC CGGGCGGCTT TCCGCCGCAG GGCCAGGGCT TCCCGCCCCC GCCTCCGCCC GGCCCGGGCT TCCCGCCGCC GCAGGGCGCG CAGGGATTCC CGCCGCCCAC TCAGCCGGGA CCGGGCTATC CGCCCCCGCC CGCCGGCGGC TACCCGCCCG TACAGGGTGG CTACGGTGCG CCGTACGGCG GCGGCCCGCA GAAGTTCAAC CTGGGCGACG GATTCTCCTG GGCCTGGAAC AAGTTCACCA AGAACGCGGC GAACCTGATC TTGGCGTTGG TGGTGCTGGG CATCATCGTG AGCATCGTCG GTTTCCTGGT GTCCGCGATC TACGGCGCCC TGTTCGGCCA GACGGCCGAT GACGGCAGCT ACACCGTGTA CTATTCGCCC GGCACGCTGC AGGGCGCGGT CTTCACACTG ATCACGGGCA TCGTGGCGTA CATCGCTCAG GCGGCGTACT TCTCCGGTGT GCTCGACATC GCGGACGGCA AGCAGATCGG CTTCGGCTCG TTCTTCAAGC CCCGCAACGT CGGTCAGGTG GCGCTGGTGT CCGTGCTCGT GTCCGTGGTC AATGCGCTCC TGAGCTTCAT CCCGTACGTC GGTTCGCTCC TGAGCATCAT CGTCGGCTTC ATCGCTGCGT TCACCTTGCT GGTGGTCGTG GACCGCGGCG TCTCCGCCGT CGACGGTGTC AAGCAGGCCG TCGAGGTGAT CCAGAAGGAC ATCGGCAACG CCATCGTGGC GTACATCATC GCGGGTCTGC TGGTGATCGC GGGTGCGATC CTGTGCGGCG TCGGCATGCT CGTGACCGTC CCGCTCGCAG CGCTGCTGAT GGTGAACGCC TACCGCCTGA TCTCCGGCGC TCAGGTGGCC CCTGCGACCG CGTAG
|
Protein sequence | MTQPPNNPGD NQGGFPPPQD PQQPGGFPPQ GQGFPPPPPP GPGFPPPQGA QGFPPPTQPG PGYPPPPAGG YPPVQGGYGA PYGGGPQKFN LGDGFSWAWN KFTKNAANLI LALVVLGIIV SIVGFLVSAI YGALFGQTAD DGSYTVYYSP GTLQGAVFTL ITGIVAYIAQ AAYFSGVLDI ADGKQIGFGS FFKPRNVGQV ALVSVLVSVV NALLSFIPYV GSLLSIIVGF IAAFTLLVVV DRGVSAVDGV KQAVEVIQKD IGNAIVAYII AGLLVIAGAI LCGVGMLVTV PLAALLMVNA YRLISGAQVA PATA
|
| |