Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_3042 |
Symbol | |
ID | 9157213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 3153153 |
End bp | 3154469 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC-1 domain protein |
Protein accession | YP_003647974 |
Protein GI | 296140731 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.166576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCGAGA TCACCCGTGG CGGCGCGAAG CGCACCGCCA AGCTGGCGGG CCTGCCACTG GGTATGGCGG GCCGCACCGC GGTCGGTTGG GGTAAGCGGC TGGCCGGCGC CGATAAGGAT GACGTGAACG CCGAACTGCA GGCCAAGGCC GCGGAACAGT TGTTCGCTGT GCTCGGCGAG CTCAAGGGCG GGGCGATGAA ACTCGGCCAG GCGATGAGTG TGATGGAGGC CGCGGTCCCG CCGGAGTTCT CCGAGCCCTA TCGCGAAGCC CTCGCCAAGC TGCAGAACGA GGCACCGCCC ATGCCCGCGG CCACCGTGCA CAAGGTGCTC AGCCAGCAAC TGGGCACCGG ATGGCGCGAG CGGTTCCAGT CCTTCGATGA CACCGCGGCG GCGTCCGCCT CGATCGGCCA GGTGCACCGC GGTGTGTGGG GCGACGGGCG CGACGTGGCC GTGAAGGTGC AGTACCCGGG TGCCGACGAG GCGTTGCGTG CCGACCTCAA GGCGCTCGGC CGGCTCAGCT CGGTGATCAA GCCGCTGACC CCGGGCACGG ATATCAAATC TCTGGTGCAG GAGCTCACGG ACCGCACCGA GGCCGAGCTG GACTACCGGT ACGAGGCGAC GAACCAGCGC AAATTCGCCA AAGCCTTCGA CGGCGACCCG AACGTGCTGG TGCCCAAGGT GATCGCGAGC GCACCGAAGG TGATCATCAG CGAGTGGGTC ACCGGTCGGC CGCTGCGGGA CGTGATCGCG AACGGCACCC AGGCCGAACG TGACGATGCG GCCGCCAAGC TCACCGAGTT CGAAGTGAGC GCGCCGGCGC GCACCGGCCT GCTGCACGGC GATCCGCATC CCGGCAACTT CATGATCGCG CCGGACGGCC GCCTGATCGC GCTGGATTTC GGTGCCGTCG CCGAGTACCC GGGCGGCATC CCGCCGGCCG TGGGACAGAT ACTGCGCCTT GCCCGCGATG AGGACTACGA CGCCCTGTTC CCGCTGCTGC GCAGTCAGGG TTTCATCCCG CCGCGGCTCG ACCTGTCGCC GGAGGACATC CGCAACTATC TCGCGCCGTA TGTCGACCCG CTGCGATCGG AGAGCTTCCA CTTCACCCGC AAATGGCTGA TGCGGGTGGC GAACACGTCG ACCGATGTGC GCAGCGAGCA GTTCCAGACG GGACGCAAAT TGTCGCTGCC GACCGAGTAC GTGATGCTGT TCCGGGTGCT CCTGGGGATG GTGGGCATCT GCTCGCAGAT GGAGGCGGAG GCGCCGTACC GCGGCATCGT CGAGCACTGG GTACCGCTAC TCGACGACGA GGACTGA
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Protein sequence | MSEITRGGAK RTAKLAGLPL GMAGRTAVGW GKRLAGADKD DVNAELQAKA AEQLFAVLGE LKGGAMKLGQ AMSVMEAAVP PEFSEPYREA LAKLQNEAPP MPAATVHKVL SQQLGTGWRE RFQSFDDTAA ASASIGQVHR GVWGDGRDVA VKVQYPGADE ALRADLKALG RLSSVIKPLT PGTDIKSLVQ ELTDRTEAEL DYRYEATNQR KFAKAFDGDP NVLVPKVIAS APKVIISEWV TGRPLRDVIA NGTQAERDDA AAKLTEFEVS APARTGLLHG DPHPGNFMIA PDGRLIALDF GAVAEYPGGI PPAVGQILRL ARDEDYDALF PLLRSQGFIP PRLDLSPEDI RNYLAPYVDP LRSESFHFTR KWLMRVANTS TDVRSEQFQT GRKLSLPTEY VMLFRVLLGM VGICSQMEAE APYRGIVEHW VPLLDDED
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