| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_3041 |
|---|
| Symbol | |
|---|
| ID | 9157212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 3152241 |
|---|
| End bp | 3153137 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003647973 |
|---|
| Protein GI | 296140730 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0466154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAATC GGCTGCGGCT CGATCCGCAT CTGACGCTGG TGGTGCGGCC GCCCACGCTC
GTGCAGCTCG GCGCGTCCGC CACGGGCGCT CCCGTGCTGC GGCCGCCGCC GTGGCTGGCC
CCGGATTCGG CTGCGGGCCT GCTGCGCTGG TTGCAGCGCT TCCGCACCGC ATCCGAAGTG
CATCGCCGGG CTGCGGATGC CGGTCTCACC GACGGCGACG TCGCCGAGTT GTTGTCGGTG
CTACGCGGTT TCGATCTCTT GGAGACCGAG CTCGCAGCAT CGAGTCTCCG AGTGCACCTG
CACGGCCGGG GCCATGTCAC CGACGCGGTG CTCAACGAGG TCGCCGACCT GGACGGTGTG
CAGGTGACGG CGGGCACCTC GCGCAGTTGG TCGCCGGAGG GCCGCGATCT CGACTTGGTG
TTGCTCACCG ATGTCCTGTC CCCGGACCCG GTGCTGGTAC GCCGTTTGAT GCGGGCGCGG
GTACCGCACC TGCCGGTGGT GGTGCGCGAC GGTGCCGGCG TGATCGGGCC GCTCGTTCTG
CCCGGCGCCT CGCCGTGCCT GCGGTGCCTG GACCGGACGC GCACCGATGC CGACCCCGGC
TGGCCGTCTC TGGCGTGCCA GTTGTTCGGG CGGTCGGGGC GGGCATCGTC GCAGGTGTTG
CGGATGACTG CCGCGGTCGC TGCGCTCCAG GTGCAGGCCA TCGCTCGCCG CGGGCCGGGC
GCGAGCGGGT CCGGCTCGGG CGACGACGGT GCCGAGTTCG GCGCGCGCAG CGACGACCCC
GCGGTCCTCG GCTGTACTTT GGAGGTCGAA GGCTGCGGTA TCGCCGTCCG GCGATGGCTC
ATGAATCCGG CATGCGGATG CGGAAGGTCC GATGCCGCAG CGCACGCGAC CGGATGA
|
|---|
| Protein sequence | MENRLRLDPH LTLVVRPPTL VQLGASATGA PVLRPPPWLA PDSAAGLLRW LQRFRTASEV
HRRAADAGLT DGDVAELLSV LRGFDLLETE LAASSLRVHL HGRGHVTDAV LNEVADLDGV
QVTAGTSRSW SPEGRDLDLV LLTDVLSPDP VLVRRLMRAR VPHLPVVVRD GAGVIGPLVL
PGASPCLRCL DRTRTDADPG WPSLACQLFG RSGRASSQVL RMTAAVAALQ VQAIARRGPG
ASGSGSGDDG AEFGARSDDP AVLGCTLEVE GCGIAVRRWL MNPACGCGRS DAAAHATG
|
|---|
| |