Gene Tpau_2980 details

Gene Information

• Locus tag: Tpau_2980
• ID: 9157148
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 3092144
• End bp: 3092911
• Gene Length: 768 bp
• Protein Length: 255 aa
• Translation table: 11
• GC content: 70%
• Product: ABC transporter related protein
• Protein accession: YP_003647915
• Protein GI: 296140672

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAGC ACGTTGGCCC ACTGAACGAT TCCCCCGCCG ACGAGCCGGT GATCGTCGCG 
CAGAACCTGG TGCGCGGGTT CGACGGCCGG GCGGTGTTGC GCGGCGTCGA CCTGACGATT 
CGCCGGGGCG AATTCGTCGC TCTGCTGGGC CGGTCCGGTT CGGGCAAGTC GACGCTCCTG 
CGCGCTATCG CCGCTTTGGA CGACGGTGTG CCCGGTTCGG GCCTGCTGGA GGTGGATCCG 
AGCCGCGCCG TGGTGTTCCA GGACTCGCGC CTGCTGCCCT GGGCGCGTGT GCTGGAGAAC 
GTGGTGCTCG GCCTCACCGG CGCCGACGCC AAGGACGTGG GCCGCGCACT GCTCGCGGAG 
GTCGGCCTCG CGGGACGAGA GAAGGCCTGG CCGAAGGAGC TTTCCGGCGG ACAGCAGCAA 
CGAGTGGCGC TGGCTCGCAG CCTGGTCCGG GAACCGGCGG TACTCCTGGC CGACGAGCCC 
TTCGGGGCGC TCGACGCGCT CACCAAACTG AAGATGCACG ATCTGCTGCG CGCGCTGGTC 
GCTCGACACC GGCCCGGTGT GCTTCTGATC ACCCACGACG TGGACGAAGC CATCGTCCTG 
GCCGACCGGA TCCTGGTGCT CGATCACGGC ATTCTCTCGG TCGATCTGGA ACTCTCCGAC 
GAAACGGGCC GCCGACCGGG CGAGAACGGA TTCGCAGAGC TTCGCAGCCG GCTCCTCGAT 
GCGCTCGGTG TGGAGCGCGA GCCCGAGCCG GTGACCGCGC CCGCATGA 

 

Protein sequence

MAEHVGPLND SPADEPVIVA QNLVRGFDGR AVLRGVDLTI RRGEFVALLG RSGSGKSTLL 
RAIAALDDGV PGSGLLEVDP SRAVVFQDSR LLPWARVLEN VVLGLTGADA KDVGRALLAE 
VGLAGREKAW PKELSGGQQQ RVALARSLVR EPAVLLADEP FGALDALTKL KMHDLLRALV 
ARHRPGVLLI THDVDEAIVL ADRILVLDHG ILSVDLELSD ETGRRPGENG FAELRSRLLD 
ALGVEREPEP VTAPA