| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2594 |
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| Symbol | |
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| ID | 9156755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 2691890 |
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| End bp | 2694652 |
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| Gene Length | 2763 bp |
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| Protein Length | 920 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003647536 |
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| Protein GI | 296140293 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCTGG TAGGCAGAGA CGGCGAATGC GCGCGGATCG ACCGGCTACT TGCCGGCGCG
CGCGCCGACC GCGGCGGCGC CCTCGTCGTC CGCGGCGAGC CCGGTATCGG CAAATCCGCC
CTCCTCGAAC ACGCTGCCCA CGAGGCGCAA GCGTCGGGAA TGCGGGTCAT CCGCGGCGCA
GGCATTGAGT CCGACGCCGA GCTGGCCCAC GGCGGCCTGC ACCAGTTGCT CTGGCCCCAC
CTGGCGCGAC TCGACGCGTT GCCCGCGCCG CAGGCCGCCG CCCTGCGCAC GGCATTCGGG
CTCGACGATG GCTTGGCGCC CAACCGTTTT CTCGTGTCAG CGGGAGCGCT CGCCCTGTTC
GCGGACCTTT CCGACGATGC GCCGCTGCTG GTGATCGTCG ACGATCTCCA GTGGCTCGAT
CGCGGTTCCA CCGAGGCTCT CCTGTTCGCC GCGCGACGCT TCGCCGCCGA TCCCATCGCG
ATGCTGTTCG CGGTCCGCGA GACGTCGATG CCCTTCGTTA CTCCCGGCGT CGACACCATC
GCGCTCGACG GGCTCCGCGC AGGTGATGCC GCCTGCATCC TCGATGCGCA CGCACCGGGG
ATCGATGGAC CTCTGCGCGC TCGCGTCCTG GATGAATCGG CGGGAAATCC GCTCGCCCTC
ATCGAACTCG GCTCACTGCG GAAGGCGGGT GACGAAAGCG CGCCGTCGGA CATCGCGGGT
CCGGTGGGTG CGCTCCCCGT GTCGCAGCGC GTGCACCTGG CCTTTCGCGG CCAGATCTCA
GCGCTCCCCG ACGCCACGCG CCGCGCCTTA CTCGCCGCGG CTGCGGACTC GGCCGCTCCG
CTTGCGACCA CGCTGCGTGT CATCGAAGCG CTCGGTGGCG GGATCGCCGA TCTCGTGCCC
GCCGAGCGGG CAGGCCTCAT CACCGTTGGA GAGCGGATCC TCTTTCGCCA TCCGCTGGTT
CGGACGGCCG CCTACCGCGG CGAGCCGCTG CCGCACCGGA TCGACGTGCA CCGTGCCTAC
GCTCATGCGG CTGCGGCTGA TGCGGACCGC CGGGCCTGGC ACCTCGCCGC TGCGACGACG
GCACCGGCCG AATCCGTCGC CGCCGAACTC GACGGTGTTG CCGAACGCGC CCGCCACCGC
GGCGGCGCCA TGGCCGTCTC GATCGCCTAC GACCGCGCGG CACGGCTCAG CGAGGACGGC
GAGCGCAGGG GCGCACGGGT CGCGCTGGCG GCGCAGGCCG CCTACGACGG CGGACGGCCC
GACCGTGCAC AGCGACTCGC CTCCGAGGCC CTGGCGCTGA GCGGCGACGC CGGGGTGCGC
GCGGATGCGG TGTACGTGCT GGGCGCGGTC GCCTACGAAC GCCAGTCTCC GCGCGCCGAC
GCCGAGCTCA CCCTCGAAGC GGCGCGGTCG ACGCTCGCGG ACGATCCGGA GCGGACCGTG
CTCGCGTTGT ACGAAGCGGG ACACGCCGCC CGGCACGGGG CGGCGGGAGA TCTGCTGCAG
GAGGTGGCCG CGGTGCTCCG CGACGTCACG CCACCCGAAG AGTGGACGCC CGTCGTCGAA
GCTCTCCTCG GTTGGGCCGA ACTCGCCGAC GGCAGGCCAG GCCATGCCAT CACCCGCATG
CTCCCACCCG TAGTGGGCTC CGGCAGTGTC CCACTGACCC ATGCCATCAC CGCCGCCATC
AGCGGGCTGC TCACCGCGCG AGAGGATGAG GTCGTTCCCG CCGTCGAGGA GACGCTCGAC
GCGGCGCGCG CAGAGGGCGC GCTGGGCTGG ATCCCGTACT TCCTCGGCGT GCTCGCGGTC
GCCCGGCTGC TCCGCGGGGA GTTCGCAGAC GCTCGCGCCT GCGTCGCCGA GGGCGCGGCG
GTGAGCGAGG AACTGGCGAA CCGCACGGAA TTGCTCGCGC ACCGTTCGCT CGAGGTGTGG
TTGCTCGCGG TGTCGGGGGA GGAGCAGAGC TGCCGGGCTC TCGCCGAGCA CGTCCTCCCC
GAGGCACGGC ACCGGCACCG CGTCGACGCC GACATCGGGA TGTGGGGGAC CGGCGTGCTG
GACCTCGCGG CGGCCCGGTA CGCGGACGCA GTGGTCGCGC TGGAGGCCGT GTGCACAGGT
CCGGCCCGGC GCGACGTCCT GCTGCGCGCC GTGCCCGACC TGGTGGAAGC AGCCGCGCGC
GGCGGCGTGC CGGAGCGGGC GGCTGGTCCG CTGGCTGACT TCGCGGAGTG GGCCGAGGTC
GTCGGCCGGC CCGTGACGAG CGGCCTCGCA CAGCGCTGCC GCGCCCTTCT CGCCGACGAC
GACGAGGCCG AGGAGCTCTA CCTCGGAGCA CTGCGCCTGC ATGAGGAGGC CGCGGGTGGC
TACGACCTGG CCCGCACCCG GCTGGTTCAC GGGGAGTGGC TGCGCCGCCG ACGGCGCCGG
ACGGAGGCCC GGGCTCAGCT CGACGCCGCG CTCGCCGGGT TCGAGGACGT CGGCGCCGCC
GCGTGGGCGC AGCGCGCTCG CAACGAGCTG GCAGCGCTGG GCGCCCCGGG GAAGGGAAAG
CGCAGCGCAG GACCACTCAA CCTGCTCACG CCGCAGGAGT TGCAGGTGGT GCGGCTCGCG
GCGGCCGGCA ACACCAACAA GGAGATCGCG GCGCACCTCT TCCTCAGCCC GCGCACGGTG
GGCTACCACC TGTACAACGC CTACCCGAAG CTCGGCGTCG CGGGCCGCGG CGACCTCGCG
GGCATCGTCG CGCAGGAACG TGGCACCGGT ACTCCGCTCC TGGAACCCGG TCATCGCGAC
TGA
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| Protein sequence | MTLVGRDGEC ARIDRLLAGA RADRGGALVV RGEPGIGKSA LLEHAAHEAQ ASGMRVIRGA
GIESDAELAH GGLHQLLWPH LARLDALPAP QAAALRTAFG LDDGLAPNRF LVSAGALALF
ADLSDDAPLL VIVDDLQWLD RGSTEALLFA ARRFAADPIA MLFAVRETSM PFVTPGVDTI
ALDGLRAGDA ACILDAHAPG IDGPLRARVL DESAGNPLAL IELGSLRKAG DESAPSDIAG
PVGALPVSQR VHLAFRGQIS ALPDATRRAL LAAAADSAAP LATTLRVIEA LGGGIADLVP
AERAGLITVG ERILFRHPLV RTAAYRGEPL PHRIDVHRAY AHAAAADADR RAWHLAAATT
APAESVAAEL DGVAERARHR GGAMAVSIAY DRAARLSEDG ERRGARVALA AQAAYDGGRP
DRAQRLASEA LALSGDAGVR ADAVYVLGAV AYERQSPRAD AELTLEAARS TLADDPERTV
LALYEAGHAA RHGAAGDLLQ EVAAVLRDVT PPEEWTPVVE ALLGWAELAD GRPGHAITRM
LPPVVGSGSV PLTHAITAAI SGLLTAREDE VVPAVEETLD AARAEGALGW IPYFLGVLAV
ARLLRGEFAD ARACVAEGAA VSEELANRTE LLAHRSLEVW LLAVSGEEQS CRALAEHVLP
EARHRHRVDA DIGMWGTGVL DLAAARYADA VVALEAVCTG PARRDVLLRA VPDLVEAAAR
GGVPERAAGP LADFAEWAEV VGRPVTSGLA QRCRALLADD DEAEELYLGA LRLHEEAAGG
YDLARTRLVH GEWLRRRRRR TEARAQLDAA LAGFEDVGAA AWAQRARNEL AALGAPGKGK
RSAGPLNLLT PQELQVVRLA AAGNTNKEIA AHLFLSPRTV GYHLYNAYPK LGVAGRGDLA
GIVAQERGTG TPLLEPGHRD
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