Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2343 |
Symbol | |
ID | 9156499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 2438471 |
End bp | 2440009 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Aminopeptidase Y |
Protein accession | YP_003647289 |
Protein GI | 296140046 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.362822 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTGCGTGT TCGCCGGGCG GATCATGGCT CAGTTGTATC TAATGGCTGC CATGGTGCAA AGGCTAAACA TCTCGACCTC AGTCCGAATG GTCTCGCTGA TCGCGGTGGC GGGCGTCGGC CTCGCCGCGT GCGGTTCGTC CACGGATCAG GCGACACCCT CGTCGTCGTC CGCGGGAGCA CCGTCGAGCG CGTCCGAGAC CCCGAAGCGA CCGGCCCCGC CCGGCGGCGC CGACGATCCG GCCGCCACCG CCAAGGCGCG CAGCCTCTCC GACGCCGCCC AACTCGACGG TGCCGTGGCA CACCTGCGAG CCTTCCAGGA CATCGCGAAC CGCAACGGCG GCAACCGCGC CCTCGGCAGC CCCGGCTACC AGCAGAGCGT CGAGTACATC GAGAACGCGC TCCGCGCGGC CGGCTACGAC ACCAAGCGAC AGACCTTCCA GGCCAGCTCG TGGACCGTCT CGAAGCAGGA GGCCAGCCTG GGAGACGCGC CGCTGAAGGT CTCCGCGCTG AGTGGCTCGG GTGCCACGGA CGGCGACCTC ACCGCCAAGG TGGTGGCCAC CGGCAACCAG GGCTGTGCCG ACGCCGATGT CAGCAAGGTG ACGCCCGGCT CGGTCGCGGT GGTGCAGCGC GGCAACTGCA CCTTCGGAGA GAAGTACAAG AAGGTCTTCG CGAAGGGGGC CGCCGCGCTG ATCGTGATCA ACAACCAGGA CGGAGACTTC AAGGGCGGCA CGTTGGGCCT CGACGACGGT GCCGGCATCC CCGTGGTTGG TGTCTCCAAG GTCGACGCGG CGGGCCTGGT CGACGGCGCA CAGGTGCAGT TGACGGTCGA CGCCAAGACC GTCAAGGCCG ATACCTGGAA CGTGATCGCC GAGACCAAGA AGGGCAACGC CGACGCCGTG CAGATGGTGG GGGCGCATCT CGACAGCGTG ACCGACGGCC CCGGTATCAA CGACAACGGC ACCGGCTCCG CAGCGGTGCT GGAGACCGCC GTGAAGCTCG GCGCCGACGC CGACGTCAAG AACAAGGTGC GCTTCGCCTT CTGGGGCGCC GAGGAGGAGG GCCTGCTGGG CTCGGAGAAG TACGTCGCGG ACCTGCCCGA GAGCGAGCGG ACCAAGATCG CCCGCTACCT CAACTTCGAC ATGCTCGGTT CGCCCAACGG CGTCCTGTTC GCCTACGACG GCGACGGCTC GTCGAAGCTC GAGGGCAGCA CCGTGGGGCC CGACGGCTCC GGCGTGATCG AGCAGGTGTT CCAGCGGTAC TTCCAGGGCA AGAACGTGCC GGTCTCGTCG AGCGCCTTCG ACGGGCGATC GGACTACGGG CCGTTCATCG CCCAGGGCAT CCCGTCGGGC GGCGTGGACA CGGGCGCGGA CGGGAAGAAG ACGCCCGAGG AGGCGCAGAA GTGGGGTGGT GACGCCGGAG TCACCTACGA CCCGAACTAC CACAGCGCCA AGGACACCAT CGACAACGTG AACATGGATA TCTACCGTTC CGCGGTCGGT GCCGTCGCGT GGGCCACGGG GTACTTCGCC GCGCTGTAA
|
Protein sequence | MCVFAGRIMA QLYLMAAMVQ RLNISTSVRM VSLIAVAGVG LAACGSSTDQ ATPSSSSAGA PSSASETPKR PAPPGGADDP AATAKARSLS DAAQLDGAVA HLRAFQDIAN RNGGNRALGS PGYQQSVEYI ENALRAAGYD TKRQTFQASS WTVSKQEASL GDAPLKVSAL SGSGATDGDL TAKVVATGNQ GCADADVSKV TPGSVAVVQR GNCTFGEKYK KVFAKGAAAL IVINNQDGDF KGGTLGLDDG AGIPVVGVSK VDAAGLVDGA QVQLTVDAKT VKADTWNVIA ETKKGNADAV QMVGAHLDSV TDGPGINDNG TGSAAVLETA VKLGADADVK NKVRFAFWGA EEEGLLGSEK YVADLPESER TKIARYLNFD MLGSPNGVLF AYDGDGSSKL EGSTVGPDGS GVIEQVFQRY FQGKNVPVSS SAFDGRSDYG PFIAQGIPSG GVDTGADGKK TPEEAQKWGG DAGVTYDPNY HSAKDTIDNV NMDIYRSAVG AVAWATGYFA AL
|
| |