| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_2162 |
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| Symbol | |
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| ID | 9156318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 2256340 |
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| End bp | 2257893 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | |
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| Product | sodium:neurotransmitter symporter |
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| Protein accession | YP_003647111 |
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| Protein GI | 296139868 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.227594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGCAG AGGTGGAAGA CCGTCCACGC GAACAGTGGG GCACGCGTGC AGGTTTCCTG
CTCGCCGCCA TCGGCTCGGC CGTGGGCCTG GGCAATATCT GGCGGTTCCC GAAGGAGGCG
TACGACAACG GCGGCGGCGC GTTCATGGTG CCCTATCTGA TTGCGCTGTT GTCCGCGGGA
ATCCCGCTAC TGATCTTCGA GTACGCGGTC GGCCACCGGC ACCGGGCCTC TGCGCCACGG
TCCATGCGGC GCCTGGGGAG ACCCGCCGCG TTCATCGGCT GGTGGCAGGT GGGCATCTGC
TTCTTCATCG CCACGTACTA CGCGGTGATC CTCGCATGGT CGGTGCGCTA CATCGGCTTC
TCCACCTCGA AGGCGTGGGG TGATGATCCG GCGGCCTTCT TCCAGAACGA CTTCCTGCAC
ACCGCGGACG CCCCCGCACT GCTCGGAGCC TTCGTGCCGG GCGTTCTCGT CCCGCTCATC
GGCGTCTGGA TCGCCACGCT GCTCGTCCTC GCGCTCGGTG TCAAGCGTGG CATCGAGAAG
GCCAACAAGA TCTTCATCCC GCTGCTGGTG GTCCTCTTCT CGATCCTCGT GGTGCGAGCC
CTGTTCCTGC CGGGCGCCGG CGACGGCCTC AACGCCCTGT TCACTCCCGA CTGGTCGGCG
ATCACCGATG GCAGTGTGTG GCAGGCGGCC TACGGACAGA TCTTCTTCTC CTTGTCCGTC
GGATTCGGCA TCATGGTGAC CTACTCGTCG TATCTCAAGC GCAAGGCCGA TCTGACCGGT
TCGGCACTGG TGGCGGGGTT CGCCAACAGC GCCTTCGAGA TCCTCGCCGG CATAGGCGTG
TTCGCGACTC TGGGCTTCAT GGCCCTGCAG GCGCAGGTGC CGGTCGGCGA GGTGGTGCAG
GGCGGCACGG GACTGGCGTT CATCGCCTTC CCTCAGGTCA TCTCGGAACT CAGCGGCGGT
TCAGCGCTGT TCGGTGTGCT CTTCTTCGGA TCACTGCTGA TCGCCGGCAT CACGTCATTG
ATGAGCATCG TCGAGGTGAT CGTCTCCGCC ATCGAGGACC GCACCGGCCT CGGACGCGTC
CCCGCCGTGC TGGCCGTGGG CGGACTGACC GCCATGGTCT CCATCGCCTT CTACCCCACG
GAAAACGGCC TGTACATCCT GGACACCGTC GACCACTTCA TCAATTCGTA CGGCATCGTC
CTCGCCGCTC TGGTCGCGAT CCTGGTCGCC GCCGTGGTCC TCAGGAAGCT CCCCGTACTG
CAGCGGCACG TGGATGCGAT CTCCAGCGTC CGGGTAGGAA CCCTCTGGCA GGTACTCCTC
GGGGTGGTGG CCCCGATCAT GCTGGTGTGG ATGAGTGTGG ACAGCCTGAT CAAGGAATTC
TCGGAGAACT ACGGTGGCTA CAGCACGTCG TTCCTGTTGG CCGCGGGCTG GGGCGTCGCG
GGTCTGGCCC TGTTCTTCGG CATCGGCATG TCGTTGGTGC CGGATCGGAA CGCGGACGGA
TTCACCCCCG GAGATCCCGG CGATCACGGG GCTCGCGAGG AGGTGAACGC ATGA
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| Protein sequence | MTAEVEDRPR EQWGTRAGFL LAAIGSAVGL GNIWRFPKEA YDNGGGAFMV PYLIALLSAG
IPLLIFEYAV GHRHRASAPR SMRRLGRPAA FIGWWQVGIC FFIATYYAVI LAWSVRYIGF
STSKAWGDDP AAFFQNDFLH TADAPALLGA FVPGVLVPLI GVWIATLLVL ALGVKRGIEK
ANKIFIPLLV VLFSILVVRA LFLPGAGDGL NALFTPDWSA ITDGSVWQAA YGQIFFSLSV
GFGIMVTYSS YLKRKADLTG SALVAGFANS AFEILAGIGV FATLGFMALQ AQVPVGEVVQ
GGTGLAFIAF PQVISELSGG SALFGVLFFG SLLIAGITSL MSIVEVIVSA IEDRTGLGRV
PAVLAVGGLT AMVSIAFYPT ENGLYILDTV DHFINSYGIV LAALVAILVA AVVLRKLPVL
QRHVDAISSV RVGTLWQVLL GVVAPIMLVW MSVDSLIKEF SENYGGYSTS FLLAAGWGVA
GLALFFGIGM SLVPDRNADG FTPGDPGDHG AREEVNA
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