Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_2087 |
Symbol | |
ID | 9156242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 2177196 |
End bp | 2177816 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003647038 |
Protein GI | 296139795 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0227018 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGCAC CGCAGACCAG ACCGGATACC CGCGCGCAGA TCCTGCGTGC CGCCCTCGAC TGGGTGGACG AGGCGGGGCT GACCCGGATC TCGATGGGCG CACTCGCCAA GCGGGCACGG CTTGCCCGGG CGACCCTGTA CCAGCACTTC ACCGGCAAGG AGGCGCTGGT CGATGCCGTG GTCGCCAGCG AGTTGGACAA GTTCTACAGC CGGATTCACG ACTACGCCGA CGGGATCGAG GACAATCGCG AGCGGCTCGC TGCCGGGTTC GCTTACGCCT ACGCCTACCT GCGGGAGCAC CGTGCGCTGC AGCGAGTCCT CGCGGTGAGC CCCAGCTTGC TCCTGCCGTA CGTGCACGGC GATTCGCCCC AGATGCAACA GGGGCGGAAG TTCTTCCTGC GCGAGATCCG GCGCGGTGAA TACCGCGACG GTGCCGATGT CGAAGCCTTC GCGGACTTCT TCGTACGACA GCTCCATTCG CTCTTGCTCA CCCCGCTGGC GCCGGTCGCC GACGCGGTCG ACGAGCCCGG ACAGACCGGC CCGAGCTCGG CGAACCTGGA AGCAGGACGG CGCTACGCGG AGATGTTCGT GTTGCCCGCC AGGGCGCAAT TCGCCGAGTA G
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Protein sequence | MAAPQTRPDT RAQILRAALD WVDEAGLTRI SMGALAKRAR LARATLYQHF TGKEALVDAV VASELDKFYS RIHDYADGIE DNRERLAAGF AYAYAYLREH RALQRVLAVS PSLLLPYVHG DSPQMQQGRK FFLREIRRGE YRDGADVEAF ADFFVRQLHS LLLTPLAPVA DAVDEPGQTG PSSANLEAGR RYAEMFVLPA RAQFAE
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