Gene Tpau_1879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1879 
Symbol 
ID9156029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1966685 
End bp1967425 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID 
ProductROK family protein 
Protein accessionYP_003646831 
Protein GI296139588 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.585103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGATA ATCACGGTTT CGGCGTCGAC ATCGGCGGCA GCGGCATCAA GGGCGGCGTG 
GTCGATATGG ACACCGGCGA ACTGGTCGGT GAGCGGTACA AGGTGCTCAC ACCGCAGCCA 
TCGACGCCGC AGGCCTGCGC GGAGGCGGTG CGAGAGGTGG TCGACAACTT CGGTTGGCAG 
GGCCCCATCG GGGTGACGGT GCCCGCCGTG GTCACCGGTG GCGTGGTCCG GACCGCCGCG 
AACATCGACC CGAGCTGGAT CGGTACGGAT GCCGACGCGC TGTTCACCGC GACGTTGGGC 
CGCGACGTCA CCGTCCTCAA TGACGCCGAT GCCGCCGGCT TGGCCGAGGA CCGATACGGG 
GCGGGCCGCG ATATGGAAGG CGTGGTGCTG CTTCTCACAT TGGGCACCGG CATCGGCTCG 
GCACTCCTGC ACAAGGGAAC GCTCGTCCCG AACACCGAGT TCGGGCACCT GCAGGTCGAC 
GGCAAAGAGG CCGAGCACCG CGCGGCGAGT TCGATCAAGG ATGCCAAGGG CTGGTCGTAC 
GAGAAGTGGG CGGAGCAGGT CTCCCGCGTC TTCCGTGAGT ACGAGAAGCT GCTGTGGCCT 
GACCTGATCG TGGTGGGCGG CGGCATCAGC CGCAAGGCCG AGAAGTGGAT CCCCATGCTG 
GACGTCGCGA CGCCGGTTGT TCCCGCGGCA CTACTGAACA CGGCGGGGAT CGTCGGCGCG 
GCGATGGCCT GCGGGGGCTG A
 
Protein sequence
MADNHGFGVD IGGSGIKGGV VDMDTGELVG ERYKVLTPQP STPQACAEAV REVVDNFGWQ 
GPIGVTVPAV VTGGVVRTAA NIDPSWIGTD ADALFTATLG RDVTVLNDAD AAGLAEDRYG 
AGRDMEGVVL LLTLGTGIGS ALLHKGTLVP NTEFGHLQVD GKEAEHRAAS SIKDAKGWSY 
EKWAEQVSRV FREYEKLLWP DLIVVGGGIS RKAEKWIPML DVATPVVPAA LLNTAGIVGA 
AMACGG