Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1872 |
Symbol | |
ID | 9156022 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1957561 |
End bp | 1960725 |
Gene Length | 3165 bp |
Protein Length | 1054 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Carbamoyl-phosphate synthase L chain ATP- binding protein |
Protein accession | YP_003646824 |
Protein GI | 296139581 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACTGC TCATCGCCAA TCGCGGCGAG ATCGCCCTGC GCGTCGTCCG GACCGCCCGC GAACTGGGCA TCCCGACCGT GGCCGTGTTC GCCGCCGATG ACGCCGACAC CCCGCACGTC GCTGCCGCAG ATACGGCGAT CGCCCTCCCC GGAAGCGGAC CCGCCGCCTA CCTCGACCAG GATGCAGTGC TCTCCGCGGC GCTGAGTTCC GGGGCGGACG CGGTGCACCC CGGCTATGGG TTCCTGGCCG AGAGAGCCGA TTTCGCAGAC CGGTGCCACG CCGCAGGCCT CACCTTCGTC GGGCCGGCCC CTCACGTCCT GCGCACCTTC GGCGACAAGG CGCGGGCTCG CGCCGCCGCG ACCGCGGCAG GCGTCCCGGT ACCCGACGCC ACGGCCGGTG GTGCCGACCT GCCCGCGGTG CGCCGCTTCG CCGCCGAGCA TCCTCGCGGC GTGATGATCA AGGCCGTCGC AGGCGGTGGT GGCCGAGGTA TGCGCGCGGT GCTTCCCGGC GACGACGTCG ACGCCGCCTA CCGCGCATGT GTCTCCGAGG CCGAACTCGG CTTCGGCGAT GGCCGGGTGT TCGCAGAGGA ATTGCAGGCG GGCGTTCGGC ACATCGAGGT ACAGATCGTG GGAGACGGGA TCGCCGCGCT TGCCATCGGG GACCGGGACT GCAGTGTGCA GCGCCGTCAC CAGAAACTCA TCGAGGTGGC CCCTGCGCCA GCGCTGTCCG ACGGGCTGCG CGCCGAACTG CACGCCGCCG CGGCGCGGCT GTGCGCAGCC GCGGGCTACC GCGGCGTTGC CACCGTCGAA TTCCTGGTGG GTGAGGACGC GGCGGTGTTT CTTGAGGTGA ATCCCCGGAT CCAGGTGGAG CACACCGTGA CCGAGGAAGT CACCGGTGTG GACCTGGTGG CGGTGCAACT CGCCCTCGCC GAGGGGTGCA GGCTGGCCGA ACTCGACCTT CCGGCCGGCG TCAGCAGCCG CGACGGCGCG GTCGGCGGTG CCACGGCAGC GGCCACGGGA ACCGCGGTCC AGGTGCGGGT CAATCTCGAA ACCCCGCTCG CCGACGGCAC CGTCGTCCCG AGCGCGGGAA CCCTCGCCGG CTACACCCCG CCCACCGGTC CGGGAGTCCG CGTCGACGGT TACGGCCGGC CGGGCCTGAC CACCTCAGCC CGCTACGACT CCCTGCTCGC CAAGGTGATC GTGCGGGCGG CGAACCCGAC GCGCGCCTAT GCCAAAGCCG AGGCGGCGCT GGGGGAGTTC GTGATCGACG GCCCCGATAC CAGCATCGAC CTGATTCGCG CCGTGCTCAC TGACGCCGAG TTCCGTTCGG GCCCTGTTGA TACGGGCTAC CTGGAACGAC GCCTCGCCGA CCTGGTGCCC GGTTCGCCGG TCGTTTCCGC GGCCGAGCCG GGCTCCTACG ATGCGGACGT GCTCACGGCG ACTCTCACCG GCACCGTCGT CGCCGTGGCC GAGACCGGTG CGGCCGTCGA ATCCGGTGCG GCCTTGGTGG TCCTCGAAGC GATGAAGATG GAGCACGAAC AGACGCTCGC CATGTCGGTG ATCGTTGCCG ACGTGCTGGT GCGGCCAGGC CAAACGGTGT CCGCAGGCAC CGCATTGCTC ACCTTCGTGC CCGCGGATGA GGCAGTCGCC GGTGGCAACG GCCGTGCCGC CGAGGATCTC GATCGCTCGC GCGCCGACCT CGACGAGGTG GCCACGAGGC ACGCCGTCAC CGAGGATGCG TGCCGGCCGG ATGCCGTGGC CAAGCGCCAC CGGATCGGTC GACGCACCGC GCGCGAGAAC ATCACTGACC TCGTCGATCC CGATTCCTTC ACCGAGTACG GCGCGCTGGT GCTTCCCGCA CAGCGGAACC GGCGCTCGGA GGAGGATCTC ATCGCCGTGG GACCCGCCGA TGGACTCGTC GGCGGCCTGG CCACCATCGG TGGCCGCGAG GCGATGGTGA TCTCCTACGA CTACACGGTG ATGGCGGGAA CCCAGGGGTG GCGCAACCAC GCCAAGACGG ACCGGCTGCT CGAGATCGCC CGCCGCAGAA GGGTGCCGGT GGTGCTCTTC GCCGAGGGCG GCGGCGGCCG GCCGGGTGAC ACCGACTTCG ATATCGTCGC TGGATTGGAC GTACCCACCT TCCGGTCGAT GGGGGCGCTG CGCGGCGAGG TCCCGCTGAT CGGCGTGGTC TCGGGCCGGT GCTTCGCCGG CAACGCCGCC CTTGCGGGGG TGTGCGACCT GCTCATCGCT ACCCCGGACT CGAATATCGG CATGGGTGGA CCGGCAATGA TCTCCGGCGG TGGACTCGGC GACTTCCCAC CCGAGGCCAT CGGCCCGATC GACGTCCAGT GCCGTAACGG AGTGGTGCAC CTCGTCGCCG ACGACGAGAT GCAGGCCGTG GCTGCTACGC GGCGATGCCT GGGCTACTTC ACCGGCGCCG TCGAGGATTG GTCCGCTCCC GATCCGCGGC GCGCGCGGCA CGTCGTGCCC GAGAACCGGC TCCGCGCGTA CGACGTTCGC GCCGTGATCG ACGCCATCGT CGATGAGGGA TCGGCCACCG AGCTGCGTCG GGACTACGGC AACGGCATGG TCACCGCGCT CGTGCGCGTC GAGGGGCAGC CGTACGCCCT CATCGCCAAC AGCACCCGGC ACCTCGGTGG TGCCATCGAT GCCGATGCCG CGGACAAGCT CGCGGATTTC CTGGAACTGG CACAGGCCCA CGGACTTCCG CTCATCTCCC TGTGCGATAC GCCGGGATTC ATGGTGGGGC CGGATGCCGA AGAGCAGGCC ACCGTCCGGC GGTTCTCCCG GCTCTTCGTG GTGGGGGCGC GGCTCACCGT GCCGATCGGC GCCATCCTCC TGCGCAAGGG CTACGGACTG GGTGCGATGG CGATGACCGG CGGTTCCTTC CACGCGCCGC AGTTCACCGT CGCGTGGCCC ACCGGTGAGA TCGGCGGTAT GGGCCTCGAA GGCGCGGTAC GCCTCGGCTT CCGTAAGGAA CTCGCAGCCG CCACCGACGA GGCCGCCCGC GCCGAACTGT TCGACCAGCT CCTCGCTCTG GCATATCAGC GTGGCCGAGC ACTGCACGCC GCCACCACGT TCGAACTCGA CGATGTGATC GACCCGGCGG CCACCCGAGC GTGGATCCGT ACCCTCGCGC GGTAG
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Protein sequence | MKLLIANRGE IALRVVRTAR ELGIPTVAVF AADDADTPHV AAADTAIALP GSGPAAYLDQ DAVLSAALSS GADAVHPGYG FLAERADFAD RCHAAGLTFV GPAPHVLRTF GDKARARAAA TAAGVPVPDA TAGGADLPAV RRFAAEHPRG VMIKAVAGGG GRGMRAVLPG DDVDAAYRAC VSEAELGFGD GRVFAEELQA GVRHIEVQIV GDGIAALAIG DRDCSVQRRH QKLIEVAPAP ALSDGLRAEL HAAAARLCAA AGYRGVATVE FLVGEDAAVF LEVNPRIQVE HTVTEEVTGV DLVAVQLALA EGCRLAELDL PAGVSSRDGA VGGATAAATG TAVQVRVNLE TPLADGTVVP SAGTLAGYTP PTGPGVRVDG YGRPGLTTSA RYDSLLAKVI VRAANPTRAY AKAEAALGEF VIDGPDTSID LIRAVLTDAE FRSGPVDTGY LERRLADLVP GSPVVSAAEP GSYDADVLTA TLTGTVVAVA ETGAAVESGA ALVVLEAMKM EHEQTLAMSV IVADVLVRPG QTVSAGTALL TFVPADEAVA GGNGRAAEDL DRSRADLDEV ATRHAVTEDA CRPDAVAKRH RIGRRTAREN ITDLVDPDSF TEYGALVLPA QRNRRSEEDL IAVGPADGLV GGLATIGGRE AMVISYDYTV MAGTQGWRNH AKTDRLLEIA RRRRVPVVLF AEGGGGRPGD TDFDIVAGLD VPTFRSMGAL RGEVPLIGVV SGRCFAGNAA LAGVCDLLIA TPDSNIGMGG PAMISGGGLG DFPPEAIGPI DVQCRNGVVH LVADDEMQAV AATRRCLGYF TGAVEDWSAP DPRRARHVVP ENRLRAYDVR AVIDAIVDEG SATELRRDYG NGMVTALVRV EGQPYALIAN STRHLGGAID ADAADKLADF LELAQAHGLP LISLCDTPGF MVGPDAEEQA TVRRFSRLFV VGARLTVPIG AILLRKGYGL GAMAMTGGSF HAPQFTVAWP TGEIGGMGLE GAVRLGFRKE LAAATDEAAR AELFDQLLAL AYQRGRALHA ATTFELDDVI DPAATRAWIR TLAR
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