Gene Tpau_1853 details

Gene Information

• Locus tag: Tpau_1853
• ID: 9156003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1937507
• End bp: 1938262
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 68%
• Product: short-chain dehydrogenase/reductase SDR
• Protein accession: YP_003646807
• Protein GI: 296139564

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.635222
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGGGGC GATTCGACGG CCGGACCGCC ATCGTCACCG GCGCTAGCCG GGGCATCGGT 
CTCGCGATTG CGCAGCGCCT CGTCGCCGAT GGCGCGAAGG TCGTGATCAC GGCACGCAAA 
CAGGAGGCCC TCGATACCGC GGTCGCCGAG CTCGGCGGCC CCGGTGCGGC CGTCGCCGTC 
GCCGGCTCGG GGGACGATCT CGCGCACCAG GACGAGGTGA TCGCCACCGC TATCGACACT 
TTCGGCAGCG CCGACTATTT CGTCAACAAC ACCGGAATCA ACCCCGTGTA CGGACCGCTC 
ATGGATCTCG ATGTGGGCGC GGCCCGCAAG ATCATGGAGG TCAACGTGAT GTCGACCCTG 
TCCTGGGTGC AGAAGGTCAA CGCGGCCTGG CAGCGCGAGC ACGGCGGCGC CATCGTCAAC 
GTCGCGTCGG TGGCCGGACT GCGCCCCGCC CCGGGTATCG CCTTCTACGG CGTCTCCAAG 
GCGGCCGTCA TCCACCTCAC CGAGGAGCTG GCAGTCGAAC TGGGACCGGA TATCCGGGTC 
AACGCGGTGG CGCCCGCCGT GGTCAAGACG CGATTCGCCA CCGCTCTGTA CGAGGGGCGC 
GAAGACGAGG TCTCCTCGGC GTATCCGCTC AAACGCCTCG GCGTCCCGGA CGACATCGGT 
TCGGTGGTCG CGTTCCTGCT CTCCGACGAT GCCGGGTGGA TGACGGGGCA GACCCTCACC 
ATCGACGGCG GCGTCCTGCT CACCGGAGGA GTCTGA 

 

Protein sequence

MAGRFDGRTA IVTGASRGIG LAIAQRLVAD GAKVVITARK QEALDTAVAE LGGPGAAVAV 
AGSGDDLAHQ DEVIATAIDT FGSADYFVNN TGINPVYGPL MDLDVGAARK IMEVNVMSTL 
SWVQKVNAAW QREHGGAIVN VASVAGLRPA PGIAFYGVSK AAVIHLTEEL AVELGPDIRV 
NAVAPAVVKT RFATALYEGR EDEVSSAYPL KRLGVPDDIG SVVAFLLSDD AGWMTGQTLT 
IDGGVLLTGG V