| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1832 |
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| Symbol | |
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| ID | 9155982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1913874 |
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| End bp | 1915106 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | Histone deacetylase |
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| Protein accession | YP_003646789 |
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| Protein GI | 296139546 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.201599 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGGT TCCCCGACTC CCAGGTGGTG TGGGATCCCT CGGTCCTCGA TTACCGCTTC
TCCCAATCGC ACCCGATGGA CCCCGTGCGG CTGCGCCTGA CGATGGAGCT GGCCCGGATG
CTCGGCGTGA TCGACGGTGC CGAGGTGGTG GCACCGCGCG GGTTCGACGT GGCCGATCTC
GCCCGGGCGC ACACCGACGA CTATCAGGCC GCGGTCCGGG TCGCCGGATC CGGCCGCTCG
CGCATCGACC TCACCGGGTT CGGTCTCGGC AACGACGACA ACCCGGTGTT CCTGCACATG
CACGAGGCGG CGGCGTCGAT CGTCGGGTCC ACGCTCTCCG GGGCCAAGGC GATCGCCGAC
GGCACCGCCA CGCGCGCCGT CAACATCGCG GGCGGTATGC ACCACGCGAT GCGCAGCCAC
GCCTCCGGGT TCTGCGTCTA CAACGACATC GCGATCGCCA TCTCCTGGTT GCTCGACCAC
GGCTACGACC GCATCGCCTA CATCGATGTC GACGCCCATC ACGGGGATGG GGTGCAGGCC
GCGTTCTGGA ACGACGCCCG GGTGCTCACC GTCTCGGTGC ACGAGGACCC GCAGCACCTG
TGGCCCAACA CCGGCTACCC ATCGGAGCTG GGCGGACCGG AGGCCCGCGG CACTGCCGTC
AACGTGCCGG TTCCCGCGTT CAGCCCGGAC GCGCTGTGGT TGCGGGCCTT CCACGCGGTG
GTTCCCTCGG TGGTCCGCGA GTTCGCGCCG CAGCTCATCG TGAGTCAGTG CGGCTGCGAC
TCGCACGCCG CCGATCCGCT CACCGATCTG TCGCTCTCGG TCGACGGTCA GCGGGCGGCG
ATCCTCGCGA TGCGGGATCT GGCCGATGAG GTCTGCGACG GACGCTGGCT CGCCGTCGGC
GGCGGTGGGT ACCAGTTGGT ATCGGTGGTC CCGCGCACCT GGACCCACCT GCTGGCGGCG
GTGGTCGGCG TGGACGTCGA CCCGGCCACC CCCATCCCGG CCGCATGGAA GGACCTCGTC
GCACAGATCC CGGCCGAGCG CCTCGGTGGC GAACCCGGCC CGCTTCCGGA GACCATGGGT
GAGAGCGGCG ATGTCGGATT CACTCCGTGG GAACCCGTCT CGCACGACCC GGCCGAGCGC
GGTATCGACG CCGCCACCGA CCGGTTCATC GCCCGCGCAC GTACCGATGT CTTCCCCCTG
CACGGACTCG ACCCGGAGGA TCCCCGTGAC TGA
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| Protein sequence | MARFPDSQVV WDPSVLDYRF SQSHPMDPVR LRLTMELARM LGVIDGAEVV APRGFDVADL
ARAHTDDYQA AVRVAGSGRS RIDLTGFGLG NDDNPVFLHM HEAAASIVGS TLSGAKAIAD
GTATRAVNIA GGMHHAMRSH ASGFCVYNDI AIAISWLLDH GYDRIAYIDV DAHHGDGVQA
AFWNDARVLT VSVHEDPQHL WPNTGYPSEL GGPEARGTAV NVPVPAFSPD ALWLRAFHAV
VPSVVREFAP QLIVSQCGCD SHAADPLTDL SLSVDGQRAA ILAMRDLADE VCDGRWLAVG
GGGYQLVSVV PRTWTHLLAA VVGVDVDPAT PIPAAWKDLV AQIPAERLGG EPGPLPETMG
ESGDVGFTPW EPVSHDPAER GIDAATDRFI ARARTDVFPL HGLDPEDPRD
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