Gene Tpau_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1818 
Symbol 
ID9155968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1898872 
End bp1899612 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content72% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionYP_003646775 
Protein GI296139532 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCGC CATCGCTGCG CGTGGGCTAC GTGCCCGGCG CCACTCCCGC CAAATGGGTG 
CGCATCTGGG ATGAACGCCA CCCGGACACC CCACTGGAGC TGGTGCCCGT CGACAGTGCG 
GCTGCCGCGG ACGCTGTGCG CGCCGGCGCA GTGGATGTAG CCCTCATGCG GTTACCGTCC 
GAGACGTCGG GACTCGCGGT GATCCCGCTG TACGAGGAAG TGACGGTGGT GGTGGTCCCG 
AAGGACCATG TGATCACCGC GGTCGATGAG ATCGCCGCCG CCGACCTCGA TGACGAACAG 
GTCCTCGTTC CCCACGACGA CACGCTCGCC TGGGCGGACG CACCGGGTGC GCCGGTCGCG 
CACCGTCCGG ACACCACAGC GGACGCCATC GAACTGGTGG CTGCGGGCAC GGGTGTCCTC 
CTCGTGCCGC AGTCCCTGGC CCGGCTGCAT CACCGCAAGG ACCTCACCTA CCGCCCGCTC 
ACCGACGCGC CGCCCGCACC GGTCGTGCTG GCCGCCGCCG AGGGCGTGCA GTCCGATGAG 
GTCGCCGAGT TCATCGGCGT GGTGCGCGGC CGCCGGGCCG GATCGTCGCG CGGGAAGGCC 
GAGCCCGCGC CGAAGCGCAG TGCTCGCGAG AAGACGCTCG CAAAACAGGC CGCGCGAGCC 
GCCGCCGGAA AGCGGGTCGG CGGGAAGGCG ACGGGCAAAC CCGGCCGCAC CGGAGGTCCC 
GCCCGACGGG GACGGCGCTA G
 
Protein sequence
MTSPSLRVGY VPGATPAKWV RIWDERHPDT PLELVPVDSA AAADAVRAGA VDVALMRLPS 
ETSGLAVIPL YEEVTVVVVP KDHVITAVDE IAAADLDDEQ VLVPHDDTLA WADAPGAPVA 
HRPDTTADAI ELVAAGTGVL LVPQSLARLH HRKDLTYRPL TDAPPAPVVL AAAEGVQSDE 
VAEFIGVVRG RRAGSSRGKA EPAPKRSARE KTLAKQAARA AAGKRVGGKA TGKPGRTGGP 
ARRGRR