| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1742 |
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| Symbol | |
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| ID | 9155892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1818759 |
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| End bp | 1820639 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | cyclic nucleotide-binding protein |
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| Protein accession | YP_003646699 |
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| Protein GI | 296139456 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.550637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACT TCTCCGACCT CGGGGAGCTG TTCGCCTTCC TCTCACAGCA CGCGCCGTTC
GACGGACTGC CGGACGAGGA ACGTGCCCGC CTGGTGGCCG ATTCGACGGT CAATGAGTAC
GCCCGGGGCG TGCTCATCCT CGATGGGATG TCGGCATCGC CGGAGCACGC GTACGTGGTG
CTCTCCGGCC AGGTGGGGCT GTGGAACCTC CCCAACGTCG CTTCGGTGGA CCGGGGCGAT
GTCGACGAGG TGGTCGGGCC CGGTGGTGTC TTCGGTTACG TGGTGATCCT GGTGGGGGCC
AAGGGCGGCC CGCGCGCCGT GGCTCTCACG GACGTCACGC TGGCGCAGTT GCCCGCGTGG
GCCGTCGCGG ACATGTTCTC CACCCCGGCC GGTGCAGCCT TCCTCGCCAC CGAACTGGCC
AAGCCGGCGC CCGGCCGTTC GTCCGAGCAA CTCAACGAGC GCAACGTGGG TGAGATCGTC
CGGCGGGACC CGGTCACCTG CCCTCCCGAT GTGAGCATCC GCGATGCCGC CACCGCGATG
ACCGACGCCA AATCCGGCTA CGTCGTGGTG CAGAACGGCG CCGGTGAGCC CTTGGGCATC
GTCACCGACC ACGACCTGCG GGCGCGGGTG ATCTCCCCAG CCCGGCCGGT CACCGATCCG
GTCTCGGCGG TGATGACAGC GCCGTTGCAT GCGGTCCCGG CCTCGACCCT CTCCAGCGAC
GTGCTGATCG ACATGCTCGA CCGCAAGCTG CACTACATGG CGGTGCTGGA TCCGAAGGGC
GTCGTCCAGG GGGTGGTGCA GGACGTCGAT TTCCTCACCG TGCCCACCAC GTCCACGTTC
GCACTGCAGC GGCGGATCGA ACGCGCACCG GCGGAGGAAC TGCCGGACAT CGGTCGAACG
ATCCGTGAGA TCTTTCCGGT GCTCACCCGG CAGCACGCGC CGGTCCGGCA CGTCTCCGGT
GTTGCGGCAG TGGCGATCGA GGCGATGGTG CGCCGCTGTA TCGAGCTCGA ACTGACCGTG
CACCCGGACC TCCGCGAAGG TGATTTCACC TGGCTCTCGC TCGGTAGCGT GTCGCGGCGG
GAAGTAGTGC CGAGCTCCGA TGTGGATAGC GCGATCATCC TCACCGATAT GCCCGGCGCT
ACCGACGAGG AGATCGAACA GCGCCGCTCT GCGGCGCTGG CGCTCGCGAC CGCTGTCCAC
GACCGGCTTG AGGAATGCGG CATCCCGTCC GACACCAACG GTGCGGTCGC CGCACAACCG
CGGTTCTGCC GGACCGAGTC CGAATGGCTC TATGCGGCAG GCGAATGGAT CGACGCGCCG
CTCTCCAACA ACGCCATGAT GATGGCGTCG CTCCTGGTGG ACGGCCGCCC GGTGTGGGGC
GATCTGACCC TGCAGCCGGT GGCCGGTGTG TACCAGCACC TGTCGGAGCA TCAGCACGCT
TTCATGCTGA TGCTCCGCGA GGCGCTCACG GCGAAGGCCA GGATTCGCTC CATGCGTGAT
GTGATCTCGC TGCGCGGCGG CACCTTCGAC ATCAAGGCCC ATGCGCTGGT TCCCGTTGTC
AATATCGCCC GGTGGGCGGC CTTGAGTCGG GGTTCGACCA AGCTGCAGAC CCGCAACCGG
CTTGCGGCCG GTGCGGATTC GCCCGTCTTG CCCGATGATT CGGCCGAAGT GCTCCGGGAC
TGCTTCTCGA TCCTCGAACG CATCCGGATG GAGTATCAGG TGGAGCAGAT GGCGAAGGGG
CGCACGCCGG GAGACGTGCT GTCCATCCGT AGGATCCCCT CGCTCGATCG CGGCCTGTTG
GAGCAGTGCG TCCGCGAGAT CGCCGCCGTG CAGCGCCGGA TGGGCAACCT CGCGCAGTAC
CTCGATACGG GGGAGTGGTG A
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| Protein sequence | MTDFSDLGEL FAFLSQHAPF DGLPDEERAR LVADSTVNEY ARGVLILDGM SASPEHAYVV
LSGQVGLWNL PNVASVDRGD VDEVVGPGGV FGYVVILVGA KGGPRAVALT DVTLAQLPAW
AVADMFSTPA GAAFLATELA KPAPGRSSEQ LNERNVGEIV RRDPVTCPPD VSIRDAATAM
TDAKSGYVVV QNGAGEPLGI VTDHDLRARV ISPARPVTDP VSAVMTAPLH AVPASTLSSD
VLIDMLDRKL HYMAVLDPKG VVQGVVQDVD FLTVPTTSTF ALQRRIERAP AEELPDIGRT
IREIFPVLTR QHAPVRHVSG VAAVAIEAMV RRCIELELTV HPDLREGDFT WLSLGSVSRR
EVVPSSDVDS AIILTDMPGA TDEEIEQRRS AALALATAVH DRLEECGIPS DTNGAVAAQP
RFCRTESEWL YAAGEWIDAP LSNNAMMMAS LLVDGRPVWG DLTLQPVAGV YQHLSEHQHA
FMLMLREALT AKARIRSMRD VISLRGGTFD IKAHALVPVV NIARWAALSR GSTKLQTRNR
LAAGADSPVL PDDSAEVLRD CFSILERIRM EYQVEQMAKG RTPGDVLSIR RIPSLDRGLL
EQCVREIAAV QRRMGNLAQY LDTGEW
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