Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1584 |
Symbol | |
ID | 9155734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1651326 |
End bp | 1652621 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | lipopolysaccharide biosynthesis protein |
Protein accession | YP_003646544 |
Protein GI | 296139301 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCTCC GTGACGCCAC CCAGTTCGCG CGGCGCGGGT GGTGGCTCGT CGTGATCTGC GCGGTCGCCG GAACGGTGCT CGGCGTCGGG TACGCGCAGT CCAGGCCCGT GGTGTACACC GCGACGGCAC AGTCCTACGT GGTGGTGAAC AACTCCGGGA CCTCGGGCGG CGACATGTAC AACTCCGTCC AGGCCGCTCA GGCCCGGATG GCCACCTACG CCGAACTCGG TACCTCCCCG AAGATCACCG CCGAGGTCGC CAAAGCGCTG CAGCTGACGA TGAGTCCGGA GGAGATCGCC GCCCAGGTGA AGGTGACCTT CGCCCCGGGG ACGTTGTTGC TGCAGTTCAC GGCGACCCAC CCGTCCGACG TGATCGCGCA GGGGCTGGCG GGGGAGACCG CACGCCAACT GGCTCGCGAG GTGTCCGAAC TCGAACTCCC CAGGCCCGGG TTGCCGCCGT GGGTGCGGCT GCTCCCCGTG ACGGACGGAT CCGGGGCCGT CGCATCGGTT GCCCCGGTGT CGAAGTACGG CGCCGCGGGT CTCGCGGTCG GTGTCCTCCT GGGGTGCGCC GCGGCCTTCG TCCTGATCAG GCTTCGTCCG CGCGTCGCGA CGGCCGGCGA ACTGGGCGAC GACCTCGGCG TCCCGGTCGT GGGCGCCGAG AACGGCGTCG CGGTGCGCGA TACCGTCGTC GCGGCCGCCG GTGCCGCCTC GGCGGAGACC GGTGTGTCGA TTCTGGTGTC GGCGGTCGAG GGTGACGCCT GGCCGATGGC GCAGACCCTC GCCGAGGATC TGGCCGACAC CGATTCCGCA GTGCTGCTGA TCGACTGTCG CGCGGTGGGA CCCGCGTCCG CCGCCCCGGC GTCGGCGGGC GAGGCGTCGG AGGGAGCGGA GCCGAGCCTG CGCGCTGCGT TGGCCGCGGG CGTCGACGGC GCTCAGAGTC TTTCCCGGAC CCTGGTGCCG GAGGCGGGCA CGTTGACGGT GCTCCCGTCC GGGGCTCGCT CCGGGGACGC ACCGGATTCG ACGGTGTCCG ATCGCCTCCT GTCACCGCGC GCGCACGACG TGGTGCGCAC GCTCGGCGCG GGCTTCGACT ACGTGATCCT CGGCGGCGTG CCGGCGGAAT CCCCGGCGCG GTTGGGCGAG AGCGTGCGCC TGGTGGTGGC GCGCCTGGGC ACGCGATCGC CGGACGGGTA CCGCCGGGCC CTCGGGATGA ACGAGCCCTC CCGGGCCGGG CACACCGTCG TCGCGGCGCA GTCGAACCCC TGGTGGCAGC GGCTTCCGAT CGGAACCAAG GCGTGA
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Protein sequence | MTLRDATQFA RRGWWLVVIC AVAGTVLGVG YAQSRPVVYT ATAQSYVVVN NSGTSGGDMY NSVQAAQARM ATYAELGTSP KITAEVAKAL QLTMSPEEIA AQVKVTFAPG TLLLQFTATH PSDVIAQGLA GETARQLARE VSELELPRPG LPPWVRLLPV TDGSGAVASV APVSKYGAAG LAVGVLLGCA AAFVLIRLRP RVATAGELGD DLGVPVVGAE NGVAVRDTVV AAAGAASAET GVSILVSAVE GDAWPMAQTL AEDLADTDSA VLLIDCRAVG PASAAPASAG EASEGAEPSL RAALAAGVDG AQSLSRTLVP EAGTLTVLPS GARSGDAPDS TVSDRLLSPR AHDVVRTLGA GFDYVILGGV PAESPARLGE SVRLVVARLG TRSPDGYRRA LGMNEPSRAG HTVVAAQSNP WWQRLPIGTK A
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