Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1329 |
Symbol | |
ID | 9155475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | - |
Start bp | 1385164 |
End bp | 1386333 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_003646297 |
Protein GI | 296139054 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.066051 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAC ATCCCGACGA GTTGGCGGGC CTCACCGGAC TGTTCACCGA CCAGGAGCGA CAGATAGCGC TGTCCGTGCG GGCGCTGTGC GCGGCGGAAG TGGAACCGCA CATCGGCCGC TGGTTCGAGG ACGGCGCGCC CGACGATCCC CGCGGTCTGA TGCGCTCGCT CGGTTCTCTC GGAGTGCTTG GCATGCACCT GGAGGGCTAC GGCTGCGGAG GGATGACGGC CACCGAATAC GGCGTGGCAT GTCTGGAGTT GGAAGCCTGC GATTCGGGGC TGCGCTCGAT GGTCTCGGTG CAGGGCTCGC TCGCGATGTT CGCGATCTGG CGGTGGGCGA GCGAGGCCGA GAAGCAGCGC TGGCTGCCCG GTATGGCCGC AGGCGAGGTG GTGGGTTGCT TCGGGCTCAC TGAACCGGAT CACGGCTCGG ACCCCGCCGC CATGCGGACG CGTGCGCGAC GTGACGGTGC CGACTGGGTC ATCGACGGCC GGAAGATGTG GATCACCAAC GGATCCGTCG CCGACGTCGC CGTGATCTGG GCGCAGACCG ACGACGGCAT CCGCGGCTTC GCAGTGCCGA CCGAGACACC GGGGTTCACC GCGAACACGA TCAAGCACAA GATGTCGTTG CGCGCGTCGG TGACCTCCGA GCTGGTACTC GACGGTGTGC GCGTACCCGA ATCCGCGGCC TTCCCCGAGG TACGCGGGCT CCGCGGCCCA CTGTCGTGCC TGAGCGAGGC CCGCTACGGC ATCGTGTGGG GAGCAATGGG TTCCGCCCGC ACGGCAATCG AATGTGCCCA GCGGTACGCG GTGGAGCGCG AGCAGTTCGG CCGGCCGATC GGCGGGTTCC AACTGACTCA GCAGAAGCTC GCCGATATGT CGCTGGAGTA CGTCAAGGGC ATCTTGCTCG CACTGCACCT GGGGCGACTG AAGGATGCGA CCGGTCTACG CCCGGAACAG GTCTCGCTCG GCAAACTGAA CAACGTGCGC GAGGCGATCG AGATCTGTCG CACCGCACGC ACCATCCTGG GGGCGAACGG AATATCGCTG GAGTACCCGG TGATACGGCA CGCCAACAAC TTGGAGAGTG TGCTCACTTA CGAGGGGACG GTGGAGATGC ACACACTGAT CCTGGGCCAG AAACTGACCG GGCAGGACGC GTTCAGGTAA
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Protein sequence | MTTHPDELAG LTGLFTDQER QIALSVRALC AAEVEPHIGR WFEDGAPDDP RGLMRSLGSL GVLGMHLEGY GCGGMTATEY GVACLELEAC DSGLRSMVSV QGSLAMFAIW RWASEAEKQR WLPGMAAGEV VGCFGLTEPD HGSDPAAMRT RARRDGADWV IDGRKMWITN GSVADVAVIW AQTDDGIRGF AVPTETPGFT ANTIKHKMSL RASVTSELVL DGVRVPESAA FPEVRGLRGP LSCLSEARYG IVWGAMGSAR TAIECAQRYA VEREQFGRPI GGFQLTQQKL ADMSLEYVKG ILLALHLGRL KDATGLRPEQ VSLGKLNNVR EAIEICRTAR TILGANGISL EYPVIRHANN LESVLTYEGT VEMHTLILGQ KLTGQDAFR
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