Gene Tpau_1320 details

Gene Information

• Locus tag: Tpau_1320
• ID: 9155465
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1377455
• End bp: 1378219
• Gene Length: 765 bp
• Protein Length: 254 aa
• Translation table: 11
• GC content: 72%
• Product: transcriptional regulator, MerR family
• Protein accession: YP_003646288
• Protein GI: 296139045

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACGGGCA CGTCTCTGAG CACGGCGCAG GTGTCGTCGG CCACCGGTTA CAGCGTGCAG 
CAGATCCGCG ATCTGGAGGC AGCCGGGGTC ATCGCGTCGG TCCCGAGGGC CGCGAACGGC 
TACCGCCGCT TCTCACGGGA ACACGTGCGT GATCTTGCGG CCTATCGCGA TCTGGCCGCG 
GCGGTGGGGC CGGTCGGTGC GCGGGCCGCG CTCCGCGGCC TACGATCTGC GGACCTCGGC 
GACGCCGTCG AGCTCGTCGC CGGTCTGCAC GCGGACCTAC GCCGCGAGCG TGAACAGGCG 
CTGTCCGCGC GGAGGGCGTT ACGCGCCGTC AACGTCGAGG GCGAGAGCGA GGCGCCGCCC 
ACCGTCGACG ATGACATGAC GATTTCGGAA CTCGCCGGTG CGCTCGGTGT GCGCGCCTCC 
ACGCTGCGCT TCTGGGAGCG CGAGGGGCTG CTCGCCCCGG ACCGGGCGAC CGACGGTGCC 
GCACGCCGGT ATCCGGTGCC GCAGGTGCGC CTCGCCCGGA TCGTGGCGGA GTTGCGCAAT 
GCCGGGTACC GGATCCCCGA GGTGCGTCGG GCCGTCGCCG CCCTGCGTGA CCTGGGTGAC 
GAGGCGTCCT CGGTCGAAGC TCTGGAGGGG CGGATCGCGG CGATCGACCG TCGGCACCTT 
GCACTGATGC GCGCCGGCGG CGTGCTCGCC GCGATCATCA CGGACCGGAT GGAAGACGAA 
GGCACCGTCG GGATTCCCGA CGGTGCCGTT CGCAGTCGAG CGTGA 

 

Protein sequence

MTGTSLSTAQ VSSATGYSVQ QIRDLEAAGV IASVPRAANG YRRFSREHVR DLAAYRDLAA 
AVGPVGARAA LRGLRSADLG DAVELVAGLH ADLRREREQA LSARRALRAV NVEGESEAPP 
TVDDDMTISE LAGALGVRAS TLRFWEREGL LAPDRATDGA ARRYPVPQVR LARIVAELRN 
AGYRIPEVRR AVAALRDLGD EASSVEALEG RIAAIDRRHL ALMRAGGVLA AIITDRMEDE 
GTVGIPDGAV RSRA