| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1281 |
|---|
| Symbol | |
|---|
| ID | 9155425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | - |
|---|
| Start bp | 1323489 |
|---|
| End bp | 1324361 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003646250 |
|---|
| Protein GI | 296139007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.20663 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTGC ACCAGCTGCG ATACGTGGTC GCCGTGGCGG ATCACGGCTC GTTCACCGCC
GCCGCGGCGG CACTGCACGT GAGCCAGTCC GGGGTCTCGG CGCAGGTCGC GAAGCTGGAG
CGGGAATTGG GACACCGACT GTTCGACCGC GGAGCACGGA CCGTCCGAAC CACCCCGGAG
GGCGCCGCAC TGCTCCCGCA CGCCCGGTCG GCGGGTGCCG CCGTCGAAAC GATCCGAGCA
ATCGCGGACG ACCTATCCGG CGTGGTTCGC GGCCATATCC GCCTCGGCAC GGTGATCGGC
TGCACGATTC CCGGCTACCT CACCGGCTTC GCCGCCTTCC GGCACGCCCA CCCGGGCGTC
ACCGTCGCCG TGACCGAGGG CAACTCGGAT GACCTGCTCT CCGCGCTCGT CGGCGGCGGA
CTGGACGTGG CACTGGTTGC GCACGCCCGG CCACTGCCCC CGGACTTACT GGGACACACA
GTAATCCGCG AACCACTCAC CGTTACCGTC CCGAACCATC ACCCGTGGGC GGCCCGCACA
TCGCTCACGT GCGCCGAGCT CGCCGGCGAG ACGGTACTGT GCCTGCCGCC CGGTACCGGC
GTGCGCACGG CCTTCGAGAT CACCTGCGCC GCCGAGCGGA TCGAGATCGC GCCGGCGGTG
CAGGCACATT CTCCCGAGGC ACTTCTCGCG CTCGCCGATC GCGGTGCCGG AGCCGCAGTA
CTCACTGCGT CGATGGCGGC CGGCCGGCCG GACAGCGCGA CGATTCCGCT CGCCCGATCC
GCCCGAACCC AGCTCTCGCT CGCCACCCGG ATCGCACCGT CGGCCGCCGC GGGTGCGATG
TCCCGGACCC TCCTCGATCA CCTGACGAGC TGA
|
|---|
| Protein sequence | MELHQLRYVV AVADHGSFTA AAAALHVSQS GVSAQVAKLE RELGHRLFDR GARTVRTTPE
GAALLPHARS AGAAVETIRA IADDLSGVVR GHIRLGTVIG CTIPGYLTGF AAFRHAHPGV
TVAVTEGNSD DLLSALVGGG LDVALVAHAR PLPPDLLGHT VIREPLTVTV PNHHPWAART
SLTCAELAGE TVLCLPPGTG VRTAFEITCA AERIEIAPAV QAHSPEALLA LADRGAGAAV
LTASMAAGRP DSATIPLARS ARTQLSLATR IAPSAAAGAM SRTLLDHLTS
|
|---|
| |