Gene Tpau_1233 details

Gene Information

• Locus tag: Tpau_1233
• ID: 9155374
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 1265592
• End bp: 1267553
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 67%
• Product: transcription termination factor Rho
• Protein accession: YP_003646203
• Protein GI: 296138960

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.303183
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGAAA CGGACGTGAC CACCAGCCCG GACACGGCTG CCTCCACCTC GGCCAGCGCA 
CAGCGCGCCG ACGAGCGGCG CCGCTCCGGC CTGAACGGCA TGGTGCTGGC CGAACTCCGC 
ACCATCGCGG GTGACCTGGG GATCAAGGGG ATCTCCGGCC TCCGCAAGGG CGACCTGATC 
GCCGCCATCA CCGCCCAGCA GGGCTCGGGC GCGGCCCCGA CGTCCAAGGC GGAGAAGCCC 
GCCAAGACCG CGCCTCCCAA GGCCGCGGCT CCGAAGGCGG ACGCTCCGAA GGCGGAGGCT 
GCCAAGGTGG AGGCTCCGAA GGCGGAGGCC ACCACGGCGG AGGCTCCGAA GACGGAGGCG 
CCGAAGAACG ACGCCCCGAA GAACGACGCC CCGAAGAACG ACGCCCCGAA GAACGACGCC 
GCCCCGGCGG ATGCCCCGAA GGACGACGCC AAGAGCGGCG CGAAGAACGA CGGCGACCAG 
CCGCAGCAGC AGCGCGAGGG TGGCCGCCGC GAGCGGAACC AGCGCCGCGG CCAGAACGCC 
GATGGCCAGA ACCAGAACGA CCGGCAGGGC GGTGACCAGA ACCGTCCGGA CCGCGACCAG 
AACCGGCAGC AGGGCCAGAA GAACAACAAC AACAACGGTC CGAACAACCG GAACCAGAAC 
AACGGACCGG ACGACGACGG TGACGGGCAG GGCCGTCGCG GGCGGCGGTT CCGCGAGCGT 
CGTCGTGGAC GTGACCGCAA CCAGAACGAC GGTGAGCCGC AGGTCAGTGA GGACGACGTC 
CTCCAGCCCG TGGCCGGCAT CCTGGATGTG CTCGACAACT ACGCCTTCGT GCGGACATCG 
GGCTACATCG CGGGACCCAA CGACGTCTAC GTCTCCATGA ACATGGTCCG CCGCAACGGC 
CTGCGCCGTG GTGACGCCAT CGTGGGCGCC GTGAAGATGC CGCGCGACGG AGAGAGCAAT 
GACGGCGGTA ACCAGGGCGG CGGTGGCGGC CGCGGTAACC AGTCCAACCG GCAGAAGTTC 
AACCCGCTGG TGCGCCTGGA CAGCGTGAAC GGCCAGGACG TCGATTCGGC CAAGAACCGG 
CCCGAGTTCA ACAAGCTCAC GCCGCTGTAC CCGAACCAGC GCCTGCGCCT GGAAACGGCG 
CAGAATATCC TCACCACCCG TGTGATCGAC CTGATCATGC CGATCGGCAA GGGGCAGCGT 
GCGCTGATCT CCGCACCGCC GAAGGCCGGT AAGACCACGA TCATGCAGGA CATCGCCAAC 
GCGATCGCCA CCAACAACCC CGAGTGCTAC CTGATGGTGG TGCTGGTGGA TGAGCGTCCG 
GAGGAGGTGA CCGATATGCA GCGCAGCACC AAGGGCGAGG TCATCAGCTC CACCTTCGAC 
CGCCCACCGT CGGATCACAC CTCGGTCGCC GAGCTCGCGA TCGAGCGGGC CAAGCGGCTG 
GTGGAGGGCG GCAAGGACGT GGTGGTGCTG CTCGACTCGA TCACCCGTCT CGGCCGTGCC 
TACAACAACT CGAGCCCCGC TTCCGGTCGG ATCCTGTCCG GTGGTATCGA TTCCACCGCG 
CTGTACCCGC CCAAGCGGTT CCTCGGCGCA GCCCGCAACA TCGAGAACGG TGGCTCGCTC 
ACCATCATCG CCACCGCGAT GGTCGAGACC GGTTCGACCG GCGACACCGT GATCTTCGAG 
GAGTTCAAGG GCACCGGCAA CGCCGAGCTC AAACTGGACC GCAAGATCTC CGAGCGCCGG 
ATCTTCCCGG CGGTCGACGT GCACCCGTCG AGCACCCGGA AGGACGAGCT GCTGCTCGCT 
CCCGATGAGG CCGCCATCGT GCACAAGCTG CGCCGTCTGC TGTCGGGCCT GGACAGCCAG 
CAGGCGATCG AGCTGTTGAT CAGTCAGCTG AAGAAGACGC AGAACAACAT CGAGTTCCTG 
ATGATGGTGC AGAAGAACAG CGGTTTCGCC GACGCCGAGT AG 

 

Protein sequence

MTETDVTTSP DTAASTSASA QRADERRRSG LNGMVLAELR TIAGDLGIKG ISGLRKGDLI 
AAITAQQGSG AAPTSKAEKP AKTAPPKAAA PKADAPKAEA AKVEAPKAEA TTAEAPKTEA 
PKNDAPKNDA PKNDAPKNDA APADAPKDDA KSGAKNDGDQ PQQQREGGRR ERNQRRGQNA 
DGQNQNDRQG GDQNRPDRDQ NRQQGQKNNN NNGPNNRNQN NGPDDDGDGQ GRRGRRFRER 
RRGRDRNQND GEPQVSEDDV LQPVAGILDV LDNYAFVRTS GYIAGPNDVY VSMNMVRRNG 
LRRGDAIVGA VKMPRDGESN DGGNQGGGGG RGNQSNRQKF NPLVRLDSVN GQDVDSAKNR 
PEFNKLTPLY PNQRLRLETA QNILTTRVID LIMPIGKGQR ALISAPPKAG KTTIMQDIAN 
AIATNNPECY LMVVLVDERP EEVTDMQRST KGEVISSTFD RPPSDHTSVA ELAIERAKRL 
VEGGKDVVVL LDSITRLGRA YNNSSPASGR ILSGGIDSTA LYPPKRFLGA ARNIENGGSL 
TIIATAMVET GSTGDTVIFE EFKGTGNAEL KLDRKISERR IFPAVDVHPS STRKDELLLA 
PDEAAIVHKL RRLLSGLDSQ QAIELLISQL KKTQNNIEFL MMVQKNSGFA DAE