Gene Tpau_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1120 
Symbol 
ID9155260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand- 
Start bp1146340 
End bp1147011 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003646091 
Protein GI296138848 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.917457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGATC TGGGCGCGAC GACCGCCGCG GGAGAATCCC GCGGAGCAGT GAATCCTGCC 
CCGCGACGCA CCGCCAGGCT GCCACGCAGC GCCCGTCGGA TCCAATTGCT GGAGGCCGCG 
AGCAGCGTCT TCGTCGATCT GGGCTACCAC TCTGCGGGGA TGGACGAGAT CGCCGTCCGC 
GCCGGAGTCA GCAAGCCCGT GCTCTATCAG CACTTCCCCG GGAAGCTGGA GCTCTACGTC 
GCCGTGCTCA ATGCGCACAG CGAAGCACTG GTGACCGGAG TCCGTGAGGC ACTGAGCAGC 
TCCACCGACA ACCACGCCCG CGTGATCGGT GCGGTCCGTT CGTTCTTCGA CTTCGTCGAC 
CGTGACAGCC AGGGCTACAA GCTGATCTTC GAGTCCGATG TGCTCGAGCC GGTGGTGCAG 
GAACGCGTCG AGGGTGCCGT CGACGCGTGC ATCGATGCGG TCTACGACCT GGTGTCCGAG 
GATTCCGGCC TCGACCCGTA CCGGGCCCGG ATGCTCGCCG TGGGCCTCGT CGGCGCCAGC 
CAGGTCAGCG CCCGGTACTG GTTGTACGCC GACCGCCCCA TCCCGAAGGA GGAGGCGGTC 
GCGACCACGG TCGAGCTGCT GTGGGGCGGC CTGAGCCACG TCCCGCTCCA AGCGGAGCGT 
CGCGGCCACT GA
 
Protein sequence
MADLGATTAA GESRGAVNPA PRRTARLPRS ARRIQLLEAA SSVFVDLGYH SAGMDEIAVR 
AGVSKPVLYQ HFPGKLELYV AVLNAHSEAL VTGVREALSS STDNHARVIG AVRSFFDFVD 
RDSQGYKLIF ESDVLEPVVQ ERVEGAVDAC IDAVYDLVSE DSGLDPYRAR MLAVGLVGAS 
QVSARYWLYA DRPIPKEEAV ATTVELLWGG LSHVPLQAER RGH