| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_1118 |
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| Symbol | |
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| ID | 9155258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 1143482 |
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| End bp | 1145092 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003646089 |
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| Protein GI | 296138846 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00868437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGCA GAACCATCAC CACTGCGAAC ACTGACATCC ATACCGAGCC CGCCGCCGCG
GAGGGCCTGC CGGACGTGCA CGTGATCGGC GACGACCACG TCTCGCCCAG CTTCGCCGAG
CTCGGCGTCG ACCAGGGCAT CGTCGACGCC CTGGGCAAGC GGGGTATCGA GCGCACCTTC
GCGATCCAGG AGCTCACGCT GCCGCTGGCG CTGGCCGGCA ACGACCTCAT CGGCCAGGCC
CGCACGGGCA TGGGTAAGAC CTACGGCTTC GGCGTCCCGC TGCTCGACCG CCTCGTCACG
CAGGCCCGTG CCGATGTCGG CGAAGACGGG CTGCGGGCGC TCGACGGCAC CCCGCGCGCC
CTCATCATCG TCCCCACTCG CGAGCTGTGC GTGCAGGTCA CCGACGATCT GGCGCAGGCC
TCCGATGGCG TGCGCGTGCA GACCACCAAG GGCGAGCGCG ACCTGAAGAT CACCTCGATC
TACGGCGGCC GACCGTACGA GGCCCAGATC GAGGCGCTGC AGAAGGGGGT CGACGTGGTC
GTCGGCACCC CGGGCCGCCT GCTGGACCTG GCGAACCAGG GCCACCTCGT GCTCGGCAAG
ATCCAGATCC TGGTGCTCGA CGAGGCCGAC GAGATGCTCG ACCTGGGCTT CCTGCCCGAT
ATCGAACGCA TTCTCACCAT GGTTCCCACC GACCGGCAGA CGATGCTGTT CTCGGCCACC
ATGCCGGGCC CGATCATCAC GCTGGCCCGC ACCTTCCTCA AGCAGCCCAC GCACGTGCGC
GCCGAGCATC ACGACGATTC CGCCGTGCAC GAGCGCACCA CCCAGTACGT CTACCGCGCG
CACGCGCTGG ACAAGACGGA GCTGGTCGCG AAGGTTCTGC AGGCGCAGGG CCGCGGCGCC
ACGATGATCT TCACCCGCAC CAAGCGCACC GCGCAGAAGG TGGCGGACGA GCTCGGCGAG
CGCGGCTTCA AGGTCGGTGC CGTGCACGGC GACCTCGGCC AGGTCGCGCG GGAGAAGGCG
CTCGGCAAGT TCCGCGACGG TTCGATCGAC GTGCTGGTCG CGACCGACGT GGCCGCCCGC
GGTATCGATA TCGACGACGT CACCCACGTC ATCAACTTCC AATGCCCCGA GGACGACAAG
ACGTACGTGC ACCGCATCGG CCGCACCGGT CGTGCGGGTA AGACCGGTAC CGCGGTCACG
CTGGTCGACT GGGACGAGCT GCACCGCTGG GAGCTCATCG ACAAGGCCCT CGGCCTCGGT
AAGCCCGAGC CGGTGGAGAC CTACAGCTCC AGCGAGCACC TGTTCACCGA CCTCGGCATC
GACCCGAAGG TCAAGGGCAG TCTGCCGGGC GTGCGCAAAC GCGCCGAGGG CGAGGTCGTC
GAGCGCACGC CGCGGGAGAA GCGCACCAGC ACCCGCACGC GCACCCGCAC GCGTGGCGGT
CGCGCCGCCG ACGGTGCCGC GGCTGCGGCG GAGGCGGGCG CGCCGGCGGA GGAGACACCG
TCGACCCGTG CCGACGGAGA CGACGCCGCG CCGCGCAAGC GCCGCCGTCG CCGCCGCTCG
GGCGCGAAGA AGACCGAGGG CGCCGCACCC GCCGAGACTG CGGGCGAGTA A
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| Protein sequence | MKGRTITTAN TDIHTEPAAA EGLPDVHVIG DDHVSPSFAE LGVDQGIVDA LGKRGIERTF
AIQELTLPLA LAGNDLIGQA RTGMGKTYGF GVPLLDRLVT QARADVGEDG LRALDGTPRA
LIIVPTRELC VQVTDDLAQA SDGVRVQTTK GERDLKITSI YGGRPYEAQI EALQKGVDVV
VGTPGRLLDL ANQGHLVLGK IQILVLDEAD EMLDLGFLPD IERILTMVPT DRQTMLFSAT
MPGPIITLAR TFLKQPTHVR AEHHDDSAVH ERTTQYVYRA HALDKTELVA KVLQAQGRGA
TMIFTRTKRT AQKVADELGE RGFKVGAVHG DLGQVAREKA LGKFRDGSID VLVATDVAAR
GIDIDDVTHV INFQCPEDDK TYVHRIGRTG RAGKTGTAVT LVDWDELHRW ELIDKALGLG
KPEPVETYSS SEHLFTDLGI DPKVKGSLPG VRKRAEGEVV ERTPREKRTS TRTRTRTRGG
RAADGAAAAA EAGAPAEETP STRADGDDAA PRKRRRRRRS GAKKTEGAAP AETAGE
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