Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_1054 |
Symbol | |
ID | 9155194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 1080754 |
End bp | 1081131 |
Gene Length | 378 bp |
Protein Length | 125 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | putative transcriptional regulator, XRE family |
Protein accession | YP_003646025 |
Protein GI | 296138782 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0488257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCAGG CATCGCCGTC GAGGCCGCTC TCGGAGCGGC TGCGATTCCT CTTCGACTAC GTCTATCCGC GCGGCCGGGA GCCATTCACG CCCACCGAGG CGGTGGACGC GATCCGGCGC GCCGGCGGGT CCATGACCAC GGGTCATCTG AGCCAATTGA TGTCGGGCAA GCGCGCGAAT CCCGGTCTCG GTGTGCTCCT GGAACTCGCC GGTTTCTTCC ACGTGCCGCT CGACTACTTC GCGGACGACG AACTGAGCGA ACAGATCCGG TCCGACATCA TCGCCGGTGC CGCGGTCCGC GATTCGGGGA ACCGGGGCGT CGCGGCCCGC CGCTACGACC CGTACCGCCG CTACGCCGAA TGGACCGCCG GCTCGTAA
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Protein sequence | MSQASPSRPL SERLRFLFDY VYPRGREPFT PTEAVDAIRR AGGSMTTGHL SQLMSGKRAN PGLGVLLELA GFFHVPLDYF ADDELSEQIR SDIIAGAAVR DSGNRGVAAR RYDPYRRYAE WTAGS
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