Gene Tpau_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1054 
Symbol 
ID9155194 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand
Start bp1080754 
End bp1081131 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content68% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003646025 
Protein GI296138782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0488257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCAGG CATCGCCGTC GAGGCCGCTC TCGGAGCGGC TGCGATTCCT CTTCGACTAC 
GTCTATCCGC GCGGCCGGGA GCCATTCACG CCCACCGAGG CGGTGGACGC GATCCGGCGC
GCCGGCGGGT CCATGACCAC GGGTCATCTG AGCCAATTGA TGTCGGGCAA GCGCGCGAAT
CCCGGTCTCG GTGTGCTCCT GGAACTCGCC GGTTTCTTCC ACGTGCCGCT CGACTACTTC
GCGGACGACG AACTGAGCGA ACAGATCCGG TCCGACATCA TCGCCGGTGC CGCGGTCCGC
GATTCGGGGA ACCGGGGCGT CGCGGCCCGC CGCTACGACC CGTACCGCCG CTACGCCGAA
TGGACCGCCG GCTCGTAA
 
Protein sequence
MSQASPSRPL SERLRFLFDY VYPRGREPFT PTEAVDAIRR AGGSMTTGHL SQLMSGKRAN 
PGLGVLLELA GFFHVPLDYF ADDELSEQIR SDIIAGAAVR DSGNRGVAAR RYDPYRRYAE
WTAGS