Gene Tpau_1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTpau_1016 
Symbol 
ID9155156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTsukamurella paurometabola DSM 20162 
KingdomBacteria 
Replicon accessionNC_014158 
Strand+ 
Start bp1043974 
End bp1044591 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content69% 
IMG OID 
ProductLGFP repeat protein 
Protein accessionYP_003645988 
Protein GI296138745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGC ACGCCACGCA TCTCAGCCAC CGCCGCACCG CCTTGCGCGT CGCCGTCGCG 
GCGGCCGCGC TCACCGTCGG CATCAGCGGC GCCGTGACCG CCGTCGCCAA GGCCGATCAG 
CAGGTGGGCC GGTTCTGGGT CAAGGGCCAG ATCGAAACGT CCTACTTCGC CACCGGCGGA 
TGGGCGCGCT GGGGCGTGCC CCTGATCCCC GAGTCGAACG CCGCCCGCGG CGGCAAGTTC 
CAGACCTTCA AGGAGAACAC CTCGTTCTAC TGGCACCCCG CCGTCGACGG CGGCAATGCG 
CACCAGATCG GCGGTGCCAT TCGGGCGAAG TGGGGTGAGA ACAACTGGGA GCGCGGCCCG 
CTGGGCTTCC CGATCACCGA CGAGATCCAT GCGCGCGGCC CGTTCAGCAC CGTGACCGGT 
GCGATGAACG CCTTCCAGGG CGGCGTCATC TACTGGTCAC CGGCCAGCGG CACCTGGCCC 
GTGTGGGGCG AGATCCTGGT GAAGTGGAGC GCCGAGAAGC GCGAATCCGG TAAGTACGGC 
TACCCGACCG GGCCCGAGGT CCGCAACGGC AGTAGTTTCT CCCAGACGTT CCAGCGCGGT 
GTGATCACCT GGCCGTGA
 
Protein sequence
MTTHATHLSH RRTALRVAVA AAALTVGISG AVTAVAKADQ QVGRFWVKGQ IETSYFATGG 
WARWGVPLIP ESNAARGGKF QTFKENTSFY WHPAVDGGNA HQIGGAIRAK WGENNWERGP 
LGFPITDEIH ARGPFSTVTG AMNAFQGGVI YWSPASGTWP VWGEILVKWS AEKRESGKYG 
YPTGPEVRNG SSFSQTFQRG VITWP