| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0887 |
|---|
| Symbol | |
|---|
| ID | 9155027 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Tsukamurella paurometabola DSM 20162 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014158 |
|---|
| Strand | + |
|---|
| Start bp | 905404 |
|---|
| End bp | 906888 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003645860 |
|---|
| Protein GI | 296138617 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCA ACGTTTCCGC CGCGGATCCG TCCGCGACGC ATGACATCGG TGCCTCGCGC
CGCAACCACC CGCTCGTAAC CGTCGTCATC CTGTGTTTCG GCGGCATGGT CGCCGCGCTC
ATGCAATCGC TGGTGATCCC CATCCAGCCC GAGCTACCCC AGCTGCTCAA CACCTCGACC
GCCAACGCCT CCTGGGTGAT CACCGCGACC CTGCTCGCCG CCGCCGTCGC CATGCCGGTC
GGCGGGCGCC TCGCCGATAT GACCGGTAAA CGCCCCGTCC TCATCCTCAG TGCCGCTCTC
CTGGTGGCCG GATCGCTCGC CGCCGCGCTG TCCGATGGTC TGGTGATGAT GCTCGTCGGT
CGCGTGCTGC AGGGTCTCGC GATGGCGTTC ATCCCGGTCG GTATCAGCAT GATGCGTGAG
GTGACCCCGC CGTCGATGAC GGCCACCGCC GTCGCCGCGA TGAGCGCCAC CCTCGGCGTG
GGCGGTGCCA TCGGCCTACC GCTCTCGGCC TGGATCGCCC AGACCTACGA CTGGCACATG
TTGTTCTGGG TCTCCTCCGT GCTCGCGGCG CTGATCCTCG CGGCGGTGGT CTTCGTGCTG
CCCAACGGCG CGCCCGGCGT CGGCGGCCGG ATCGACGTGA TCGGCACCGT CGGGTTGGCC
GTCGGCCTGG TCGGCGCGCT CGTCGCGATC AGCAAGGGCA ACGACTGGGG CTGGACCTCG
GTGGGCACCC TCACGCTGGG CCTCGGCGGC GTGGTGGTCC TGGTGGCCTG GGGCGCCTAC
GAACTCCGGC ACGACGATCC GCTGGTCGAT CTGCGCACCT CCGCGCGGCC GCGGGTGCTC
ATCACCAACA TCGCGACCAT CACCATCGGC TTCGGGATGA TGGCCATGAT GCTGTGCGTC
CCGCAGATCA TGGAGTACCC CACCGCCACC GGCTTCGGCC TGGGCAAGTC GCTGCTCGAA
GCGGGGCTGT GGATGATGCC GGGCGGCATC ATGATGATGA TCTTCGCCCC GGTCTCCAGC
ATCCTGATCC GCAAGATCGG CCCCACCTAC ACCCTGGCCA TCGGCGCGCT GGTGGTCTCG
CTGGGCTACG TGCTCGCCTA CCTGATGATG GACGCGGCGT GGAAGCTGTC GTTGGCCAGC
ATCGTCGGCA CGGTCGGTGT CGCCATCGCC TACGCCGCCA TGCCCACCAT CATCATGTCG
GCGGTGCCGC AGAACGAGAC CGGTGCCGCG ATCGGCCTCA ATGCGCTGAT GCGCTCGCTC
GGTACCACCA TCTGCTCGGC TGTGGCCGCC GCGATCATCT CCGCGAAGTC GGTCACCATG
GCGGGGCACG TTGTCCCCAC CGCCGGCGCC TTCCAGACCA TCTTCGTAGT CGCCGCCGTC
GCCGCTCTGG CCGCCGCCGT GATCGCGGTC TTCATCCCGC GCGGCACCAC CGGCGAGGCT
GGCGTTCCGG CGCCGGAGAT GGCGGGAAGT ACCGCGCGCG ACTGA
|
|---|
| Protein sequence | MTSNVSAADP SATHDIGASR RNHPLVTVVI LCFGGMVAAL MQSLVIPIQP ELPQLLNTST
ANASWVITAT LLAAAVAMPV GGRLADMTGK RPVLILSAAL LVAGSLAAAL SDGLVMMLVG
RVLQGLAMAF IPVGISMMRE VTPPSMTATA VAAMSATLGV GGAIGLPLSA WIAQTYDWHM
LFWVSSVLAA LILAAVVFVL PNGAPGVGGR IDVIGTVGLA VGLVGALVAI SKGNDWGWTS
VGTLTLGLGG VVVLVAWGAY ELRHDDPLVD LRTSARPRVL ITNIATITIG FGMMAMMLCV
PQIMEYPTAT GFGLGKSLLE AGLWMMPGGI MMMIFAPVSS ILIRKIGPTY TLAIGALVVS
LGYVLAYLMM DAAWKLSLAS IVGTVGVAIA YAAMPTIIMS AVPQNETGAA IGLNALMRSL
GTTICSAVAA AIISAKSVTM AGHVVPTAGA FQTIFVVAAV AALAAAVIAV FIPRGTTGEA
GVPAPEMAGS TARD
|
|---|
| |