| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0828 |
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| Symbol | |
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| ID | 9154968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | - |
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| Start bp | 836780 |
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| End bp | 838462 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_003645803 |
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| Protein GI | 296138560 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGGAG TGAGCGGTCA TCCGGGGCAG CAGCACTATC CCCCCGACGA GCCCCGGAGG
CGTCCGGGGC CGGTTCCCCG TGCCCGGGTG GGCGCACCGT CGGGCGACGC GGCGCACGAG
AACGCCGAGA CCGGCCCGGC CCGGCCGCAG TACCGCACCA ACCATCACCT ACCGCCCCTC
GACGAGACCC CGACGCCCAG CGAGCGCCGC GCCGCCGAGG AGGAGCAGCG GCGCGTGCCG
CGCAAGATCA CGGTGACTCG GGTGGCCGCG ATGCGCAGCC GCGAGATCAC CGAGGCCGGC
ATCAAGAAGT GGCACCGGGT CACCAAGGCC GACGGTGCCG ACAAGTCCGG CCTCACCGCG
CTGACCTATC CGGTGATCCT CAACAACGCC GTCGACGCCG CGCTCATGGT CGCGCTCGCG
AACACCCTGT TCTTCGCCGC GGCCCAGGCC GAGTCCAAGT CGAAGGTGGC GCTGTACCTC
CTGGTGAACA TCGCCCCCTT CGCGGTGATC GCCCCCTTCA TGGGGCCGCT GCTGGACCGG
ATCCAGCACG GCCGCCGAGT GGCGCTCGCG GCCAGCTTCG GCATCCGGGT GGGGCTCGCC
GTGCTGCTCA TCACCAACTG CACCTACGAC TCGATCGCGA ACACGGTGAA CTTCGATCCG
TGGGTGCTCT ACCCGTGCGC GCTCGGGATG ATGGTGATGA GTAAATCCTT CTCGGTACTC
AAATCCGCGG TCACCCCCCG CGTGCTACCA CCCCAGATCG ATCTGGCCCG GGTGAACTCG
CGGCTCACCC TGTTCGGGTT GGTCGTGGGT TCCGGTGTGG GTGGCGCGAT CGCCGCCGCC
GCCGAGTTCG GCCTGGGCCG CTCGCTGCAC ATGCCCGGCG CGATCCTGGT GCTCATGGTG
TTCGCCGTGG CGGGCGCGGT GATGTGCATG CGGATTCCGA AGTGGGTGGA GAGCACCGCG
GGCGAGGTGC CCACCACGAT GACGTACACG GGCGCGATCG ATCGCGAGGA CACCGGCGGC
CGCGCGAGCC TGGGCGCCGC GTTCAAGAAT CTGCGGGTGC CGCTCGGCCG CAACGTGGTC
ACCGGTATCT GGGGCAACAC CACGATCCGT GTGCTCACCG GCTTCCTCAC CCTCTACATC
GCGTTCTACT CCAAGGCGCA GCAGGCGTCC GGTACCGAGG CCTTCACCGC GCTGGCCATG
GTCGGCGCGG TCGGTGCCGC GGCCGGCGTG GGCAACTTCA TCGGCAACGG CATCGGTGCC
CGGATGCAGT TGCCGCGGCC CGCGCGCATC GTCGTGCAGG CCACCATCGC GGCGACCGTC
GGCGCGATCT TCGCGGCGGC GCTGTCGAAC CTCGTGGTCA TCACCGCCAT CACGTTCCTC
GCCTCGGGCG CCTCCGCGAT CGGCAAGGTC TCGCTCGACG CTTCCATCCA GGACGACCTG
CCCGACGAGT CGCGCGCCTC GGCCTTCGGC CGTTCGGAGA CGGCGCTCCA GCTCGGATGG
GTCGGCGGTG CGGCACTCGG CGTGTTGCTA CCGCCTACTC TGTGGATAGG CTTTGCGACT
GTAGCGGCCA TCATGGTGGC GGGCACCGTC CAAACGGTGC TCACCTATCG AGGCGGGTCC
CTGATCCCGG GCCTCGGCGG GAAGCGGCCG GAACACATCC CACCCACGAT GAACGGGGAC
TAG
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| Protein sequence | MGGVSGHPGQ QHYPPDEPRR RPGPVPRARV GAPSGDAAHE NAETGPARPQ YRTNHHLPPL
DETPTPSERR AAEEEQRRVP RKITVTRVAA MRSREITEAG IKKWHRVTKA DGADKSGLTA
LTYPVILNNA VDAALMVALA NTLFFAAAQA ESKSKVALYL LVNIAPFAVI APFMGPLLDR
IQHGRRVALA ASFGIRVGLA VLLITNCTYD SIANTVNFDP WVLYPCALGM MVMSKSFSVL
KSAVTPRVLP PQIDLARVNS RLTLFGLVVG SGVGGAIAAA AEFGLGRSLH MPGAILVLMV
FAVAGAVMCM RIPKWVESTA GEVPTTMTYT GAIDREDTGG RASLGAAFKN LRVPLGRNVV
TGIWGNTTIR VLTGFLTLYI AFYSKAQQAS GTEAFTALAM VGAVGAAAGV GNFIGNGIGA
RMQLPRPARI VVQATIAATV GAIFAAALSN LVVITAITFL ASGASAIGKV SLDASIQDDL
PDESRASAFG RSETALQLGW VGGAALGVLL PPTLWIGFAT VAAIMVAGTV QTVLTYRGGS
LIPGLGGKRP EHIPPTMNGD
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