Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpau_0531 |
Symbol | |
ID | 9154667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Tsukamurella paurometabola DSM 20162 |
Kingdom | Bacteria |
Replicon accession | NC_014158 |
Strand | + |
Start bp | 561341 |
End bp | 562009 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | peptidase S1 and S6 chymotrypsin/Hap |
Protein accession | YP_003645511 |
Protein GI | 296138268 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTGGCGT CGACCTGCAC CGTCGCGTTC GTCGCCGAGC GTCCGGATGG ACGCCGCGTC GCACTGACCG CCGGACACTG CGGTAAGCGG GGGCAGGCCG TGGGCGCCCC GGTTCCCGGT AAGCCCGACG CGCTGGTGCG GGTGGGGACC TTCGCGCAGT CGTCGAATCC GCCGGCCCGG ACGACCCCCG AGGGCTACGT GCTCCCCGAG GATCTGACGG CTCCTGACTG GGGTGTCATC GATCTGCGTC CCACCACGAA GAGCGCCGCC GAGCGTGGTC CGGTGCGGCC GACTCGTGTG GGTGAGGCCC GCGTGGGCGA CCGCGTGTGC CAGCAGGGGG TCACCTCGGG ATGGCGCTGC GGCGTGGTGC GGGTCGTGAG CCCCACCCAG ATCAGCACCG ACATCACCAG CCGCCCCGGC GACAGTGGTG GCCCGCTGAT TCGCCTGTCC GACGGCGCCG CGCTGGGCAT CGTCTCGGGC GGCACCGCCG CTGAGGCCCC GCGCGACGTG CCCCGGATGA CCTTCTACTG GAGCCTGCGC GACGCGCTCG CCCAGGGCGG GGGACTGCGC CTGGTGACCG CGGGTACGCC GGCGGCCCAG CGGGTTTCGT CTCCTGAGGT GCGCGAGGTC ATCACCGTCG ACGGAACGGT TCCCGTCGGC GTCTTCTGA
|
Protein sequence | MLASTCTVAF VAERPDGRRV ALTAGHCGKR GQAVGAPVPG KPDALVRVGT FAQSSNPPAR TTPEGYVLPE DLTAPDWGVI DLRPTTKSAA ERGPVRPTRV GEARVGDRVC QQGVTSGWRC GVVRVVSPTQ ISTDITSRPG DSGGPLIRLS DGAALGIVSG GTAAEAPRDV PRMTFYWSLR DALAQGGGLR LVTAGTPAAQ RVSSPEVREV ITVDGTVPVG VF
|
| |