Gene Tpau_0504 details

Gene Information

• Locus tag: Tpau_0504
• ID: 9154640
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Tsukamurella paurometabola DSM 20162
• Kingdom: Bacteria
• Replicon accession: NC_014158
• Strand: +
• Start bp: 531138
• End bp: 531836
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 70%
• Product: tRNA/rRNA methyltransferase (SpoU)
• Protein accession: YP_003645484
• Protein GI: 296138241

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACCGACC CCGACGCAGC CGCCGGCGCG GAGGCCGGCC CCACCGAATG GATCACGGGC 
GTCGCGGGTC CGCATACCGT CGGGTTGGGG CCGTGGGAGC AGGAGCATCC CGGCGTGCCG 
CTGCCGGTCG ATCCCCGATA CGACCCGGAC CTGCTCGCCC AGGGGGATCG CCGCAACGTG 
GTCGACGCCT ATCGGTACTG GACGCGCGAG GCGATCGTCG CCGATCTGGA CAGCCGCCGA 
CACCCGTTCG AGGTGGCCAT CGAGAACCTA GGCCACGATG CCAACATCGG CACGGTGGTG 
CGCACGGCCA ATGCCTTCGG GGCGCGGACG GTGCATATCG TGGGACGTCG TCGGTGGAAT 
CGTCGGGGCG CCATGGTGAC CGACCGCTAC CAGCACGTGC AGCATCACCC GGACGCCGAG 
TCCTTCGCGG CGTGGTGCGC CGAACACGAC CTTCCGATCG TCGCGGTGGA CAATCAGCCC 
GGATCGGTGC CGCTGGAACG TGGCTCGCTC CCGCGCCGCT GTGTCCTGCT GTTCGGCCAG 
GAGGGGCCCG GTGTTTCCGG TGATGCCCGC CGCGTGGCGG GAACGACGGT GTCGATCGCC 
CAGTTCGGCT CGACGCGCTC GATCAATGTG GGGGTCGCGG CCGGTATCGC CATGCACGCC 
TGGGTACGCG AACACGCCGA CCTGGACGCC GCCTGGTAG 

 

Protein sequence

MTDPDAAAGA EAGPTEWITG VAGPHTVGLG PWEQEHPGVP LPVDPRYDPD LLAQGDRRNV 
VDAYRYWTRE AIVADLDSRR HPFEVAIENL GHDANIGTVV RTANAFGART VHIVGRRRWN 
RRGAMVTDRY QHVQHHPDAE SFAAWCAEHD LPIVAVDNQP GSVPLERGSL PRRCVLLFGQ 
EGPGVSGDAR RVAGTTVSIA QFGSTRSINV GVAAGIAMHA WVREHADLDA AW