| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0162 |
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| Symbol | |
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| ID | 9154296 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 165933 |
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| End bp | 167888 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | putative galactofuranosyltransferase |
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| Protein accession | YP_003645155 |
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| Protein GI | 296137912 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTTCCA CCGATACTCA GGCGAAAACC CTTCTGCAGC GCGTCATCCT GCCGCGCCCG
GGTGAGCCGC TCGACGTGCG CTCGCTGTAT CTCGAAGAGG CCGAGACCAA CTCACGTCGC
TCGCACGCGC CCACGCGCAC GTCGCTGAAC ATCGCCGGAG AGTCCGAGGT CAGCTTCGCC
ACCTACTTCA ACGCCTTCCC GGCGTCGTAT TGGCGCCGCT GGACGGTCCT GAAAGACGTG
GTGCTGCGGA TCGAGCTCAA GGGCACGGCC CGGGTCGATC TGTACCGCTC CAAGGTCGAC
GGTGCGCGGA TCGCTCTGGG CGGCAACCTC GTCGAGACCG ACGCCACCGG CTACGGCGTC
GCCGAATTCG CCACCGATCT CGGCCCGTTC GAGGACGGCG GCTGGATCTG GTTCGACGTG
ACCGCCGATT CCGATACCGA GATCATCTCC GCAGGCTGGT ACGCCACCGT CTCCGAGGAG
GGCCTGCCGG ACAAGCGCGT CACCGTCGGC ATCCCCACCT TCAACCGGCC CGACGACGCT
GTGGCCGCGA TCCGCGCGCT CACCAGCGAC CCGCTGGTCG ACGAGGTGAT CGACGCCGTC
CTCATGCCCG ATCAGGGCAA CAAGAAGGTG ATCGACCACC CGGATTACGC CGACGCCATC
GCTCCCCTCG GTGACCGGTA CCAGCGGTTC GAGCAGGGCA ACCTCGGCGG CTCCGGCGGC
TACGGCCGCA TCATGTACGA GGCGCTGCGG CTCACCGACA GCCCCTACGT GCTGTACATG
GACGACGACA TCGCCATCGA GCCGGATTCG ATCCTGCGCG CACTGCAATT CGCCCGCTTC
GCCAAAACCC CGATGCTCGT CGGCGGCCAG ATGCTGAACC TGCAGGACCG CAGCCACCTG
CATTGCATGG GCGAGGTCAT CGACCGGGGC GCCTTCATGT GGACCGCCGC CCCCTTCGTC
GAATACGACC ACGACTTCTC GAAGTACCCG CTCTCCGACA AGGAGAACAG CAAGAACCTG
CACCGGCGCA TCGATGTCGA CGGCAACGGC TGGTGGATGT GCCTCATCCC GCGCGTCGCC
GCCGAAGAGA TCGGTCTGCC GATGCCGCTG TTCATCAAGT GGGACGACTG GGACTACGGC
CTGCGGGCCG CCGAACACGG CTACCCCACG GCGACGGTGC CCGGCATCGC GATCTGGCAC
ATGGCCTGGT CCGATAAGGA TGACGCGATC GATTGGCAGG CCTACTTCCA TCTGCGCAAC
CGACTGGTGG TCGCGGCGCT GCACCACGAG GGCAGCACCC GCGGCATCAT GTCCAGCTCG
ATCAAGGCGC TCATGAAGCA CCTGCTGTGC CTGGAGTACT CGACGGTCGC GATTCAGATC
GAGGCCATGC GCGACTTCCT GCGCGGCCCC GAGGCGTTGT ACGAGCTGCT TCCGACGGCT
CTGCCCAAGG TCGCGGCCAT GCGTAAGGAG TACCCGGATG CCGTGGTGCT CCCCAGCGCC
ACCGAGCTTC CGCGCACCAC CGGCGCCGCG ACCGCGCTCG GCACGAAGAT CCCGCTGAAC
CCGATCACCA AGGTCAAGAC CCTCGCAGCG GCGGTGCGCA ACAACCTGCG CCCTGCCGAT
CCGCACAACC ACGAGGTGCC GCAGGCCAAC TACCCGCCGC TCGAGGCGCG GTGGTTCAGC
TTGGGCCGGG TGGACGGCGT CACCGTCACC ACGGCCGATG GTCGCGGCGT GGTCTATCGC
CAGCGCGATC GGGAGAAGAT GTTCGCGCTG ATGCGCGAGA GCCTCACGGT GCACCGCGAG
GTCGATCGCC GCTTCGAGGA GATGAAGCAG CGCTACCGGG CCGCGTACGG CGACCTGACC
AGCCGCGAGG CGTGGTCGAA GATCTTCGAG CCCACGACGC CGGGAGCGGA GCGAGCGGGG
CGAATCGAAC CCGAGAACGC GGGGGAGCAG AAGTGA
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| Protein sequence | MSSTDTQAKT LLQRVILPRP GEPLDVRSLY LEEAETNSRR SHAPTRTSLN IAGESEVSFA
TYFNAFPASY WRRWTVLKDV VLRIELKGTA RVDLYRSKVD GARIALGGNL VETDATGYGV
AEFATDLGPF EDGGWIWFDV TADSDTEIIS AGWYATVSEE GLPDKRVTVG IPTFNRPDDA
VAAIRALTSD PLVDEVIDAV LMPDQGNKKV IDHPDYADAI APLGDRYQRF EQGNLGGSGG
YGRIMYEALR LTDSPYVLYM DDDIAIEPDS ILRALQFARF AKTPMLVGGQ MLNLQDRSHL
HCMGEVIDRG AFMWTAAPFV EYDHDFSKYP LSDKENSKNL HRRIDVDGNG WWMCLIPRVA
AEEIGLPMPL FIKWDDWDYG LRAAEHGYPT ATVPGIAIWH MAWSDKDDAI DWQAYFHLRN
RLVVAALHHE GSTRGIMSSS IKALMKHLLC LEYSTVAIQI EAMRDFLRGP EALYELLPTA
LPKVAAMRKE YPDAVVLPSA TELPRTTGAA TALGTKIPLN PITKVKTLAA AVRNNLRPAD
PHNHEVPQAN YPPLEARWFS LGRVDGVTVT TADGRGVVYR QRDREKMFAL MRESLTVHRE
VDRRFEEMKQ RYRAAYGDLT SREAWSKIFE PTTPGAERAG RIEPENAGEQ K
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