| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tpau_0107 |
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| Symbol | |
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| ID | 9154241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Tsukamurella paurometabola DSM 20162 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014158 |
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| Strand | + |
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| Start bp | 113146 |
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| End bp | 117753 |
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| Gene Length | 4608 bp |
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| Protein Length | 1535 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_003645100 |
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| Protein GI | 296137857 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCGTT TCGTCCCCCC GGGTCCGCAG GGGCTGTACC ACCCCGCGAA CGAGCACGAT
GCGTGTGGCG TCGCGTTCGT GGTGGACATG CACGGCCGCA AGTCCCGCGA CATCGTCGAC
AAGGCCATCA CGGCGCTGGT CAACCTCGAG CACCGCGGTG CCGCCGGCGC GGAGCCGAAC
ACGGGCGACG GTGCGGGCAT CCTGATCCAG GTCCCCGATC GCTTCTTCCG CGAGGTCGTC
GACTTCGACC TGCCGCACCA GGGTGCATAC GCGACCGGTA TCGCCTTCCT TCCGCAGGCC
GCCGCCGAGG CGGGCAAGGC CGCCGAGGGG GTCGAGCGGA TCGTCGCCGA AGAGGGCATG
ACCGTCCTCG GCTGGCGCGA CCAGCCCACC GACGACGGCT CGCTCGGTGC GCTCGCCCGT
GACGCCATGC CCACCATGCG GCAGGTGTTC ATCGCCGGGA CCGATGCGGA GGGTGCGCCC
CTGTCGGGCC TCGACCTTGA GCGTCGCTGT TTCGTGATCC GCAAGCGCGT CGAGCGCGAG
CTCGGGACCG ACGGTGCCGG CGCGGGTTCG CAGGGCGAGG AGTCGGTGTA CTTCCCGTCG
CTGTCCGGTC AGACCTTCGT CTACAAGGGC ATGCTCACCA CCCCGCAGCT GCGTGGGTTC
TTCGTGGACC TGCAGGACGA GCGGGTGGAA TCGGCTCTCG GCCTGGTGCA CTCGCGCTTC
TCCACCAACA CGTTCCCGAG CTGGCCGCTG GCCCATCCGT ACCGTCGCGT CGCGCACAAC
GGTGAGATCA ACACCGTCGG TGGCAACGAG AATTGGATGC GAGCGCGCGA GGCGCTGCTC
GACCCGTCGG TCTTCGGTGC CGATGCCGAG AACAAGATCT TCCCGATCTG CACCCAGGGC
GGTTCCGACA CCGCACGATT CGATGAGGTG CTCGAGCTGT TGCACCTCGG CGGGCGAAGC
CTGCCGCACG CGGTCCTGAT GATGATTCCC GAGGCGTGGG AGCGCCACCA GGACATGGAC
CCGGCGCGTC GCGCGTTCTA CGAGTACCAC TCCTCGCTGA TGGAGCCCTG GGACGGTCCC
GCCTCGGTGT GTTTCACCGA CGGCACCGTG ATCGGAGCCG TGCTCGACCG CAACGGCCTT
CGTCCGTCGC GTATCTGGGT CACCAAGGAC GGTCTCGTGG TGCTCGGATC CGAGGTCGGC
GTGCTCGACA TCCCGCACAG CGACGTGGTC TTCAAGACCC GTCTGCAGCC CGGCCGTATG
TTCCTCGTCG ACACCGCGCA GGGCCGCATC GTCTCCGATA AGGAGATCAA GGACGAGCTG
GCCGCGGCCG AGCCCTACCA GGAATGGCTC GACGAGGGTC TGCTGCGCCT GTCCGAGCTG
CCCGACCGGC CGCACCCGGT GATGCCGCAC GACCGGGTCA CCCAGCGCCA GCAGATGTTC
GGCTACACCA CCGAGGAGCT CAACCTGCTC CTGACGCCGA TGGCGAAGAC CGGCGCCGAA
GCGATCGGCT CCATGGGTAC CGACACTCCC GTCGCCGTGC TGTCGCTGCG CCCGCGCTTG
CTGTTCGACT ACTTCCAGCA GTTGTTCGCC CAGGTGACCA ACCCGCCGCT GGACGCCATC
CGCGAGGAGA TCGTCACCAG CCTCGGCGGC ACGATCGGCG GCGAATCCGA CCTGCTGAAC
CCGTCGCCGG TGAGCTGCCG CCAGATCCAC CTGGACCAGC CGATCCTCAA CAACGACGAG
CTGATCAAGC TGGTCAAGGT CAACGATGAC GGCACGCTGC CGGAGTTCCG CTCCGTGGTG
ATCCCCGGAC TGTACGCCGT GGCCGAGGGC GGCAAGGGCC TGCGCGAGGC ACTCGATACC
GTGCGGACCC AGGTCTCCGA GGCGATCGCC GGAGGCGCCC GCCTGATCAT CCTGTCGGAC
CGCAACTCCG ACCGGCTGCT GGCGCCGATC CCGTCGCTGC TACTGACCGC GGCCGTGCAC
CACCACCTGG TGCGTGAGCG CAGCCGCACC AAGGTGGGGC TGATCGTGGA GTCGGGCGAC
GCCCGCGAGG TGCACCACAT GGCCGCGCTC ATCGGATGCG GTGCCGCCGC GGTGAATCCG
TACATGGCCT TCGCCACCAT CGAGGACATG CACCTGCGCG GTGAGCTGAA CGGCTTGCCG
CTGGAGAAGC TGAACGCCAA CTACGTCAAG GCCGCGGGCA AGGGCGTGCT CAAGGTGATG
TCGAAGATGG GCATCTCCAC CCTGGCCTCG TACACCGGCG CACAGCTGTT CCAGGTGATC
GGTATCGCGC AGGATGTGGT GGACGAGTTC TTCTCCGGCC TGCAGAGCCA GCTCGACGGC
ATCGGTCTGG ACGAGATCGC CGACGACGTC GCCGCACGGC ACAAGCGGGC GATGAACGAC
CGTCCCGAGG AGCTGGCGCA CCGCGAGCTC GAGGTGGGCG GCGAGTACCA GTGGCGCCGC
GAGGGTGAGT ACCACCTGTT CAACCCGGAC ACGGTGTTCA AGCTCCAGCA CGCCACCCGC
ACGGGCCAGT ACAAGGTGTT CAAGGAGTAC ACGAAGCTGG TCGACGACCA GAGTGCGCGG
CTCGCCTCCC TGCGCGGATT GTTCACGTTC GTGCCCGACC GGGAGCCGAT CCCGCTCGAC
GAGGTGGAGC CCGCCAGCGA GATCGTCAAG CGCTTCTCGA CCGGTGCCAT GAGCTACGGC
TCCATCTCGG CGGAGGCGCA CGAGACCCTG GCCATCGCCA TGAACCGACT CGGCGGCCGT
TCGAACTCCG GTGAGGGCGG CGAGGATCCG GCGCGGTTCA CGCCTGACGA GAACGGCGAC
CTGCGCCGGT CCGCGATCAA GCAGGTCGCA TCGGGCCGGT TCGGCGTCAC CTCGCACTAC
CTGAGCAACT GCACCGACAT CCAGATCAAG ATGGCGCAGG GCGCGAAGCC GGGCGAGGGT
GGCCAGCTGC CGCCGCACAA GGTGTACCCC TGGGTCGCCG AGGTGCGCGG TTCGACGCCG
GGCGTCGGTC TGATCTCGCC GCCGCCGCAT CACGACATCT ACTCGATCGA GGATCTGGCG
CAGCTGATCC ACGACCTGAA GAACGCGAAC CCGTCGGCCC GTATCCACGT GAAGCTGGTC
TCGGAGCTGG GGGTAGGTAC CGTGGCCGCC GGCGTCTCCA AGGCGCACGC CGATGTGGTG
CTCATCTCGG GCCACGACGG CGGCACCGGA GCCACCCCGC TGACCTCGGT CAAGCACGCC
GGCGCCCCCT GGGAGATCGG CCTTGCGGAG ACTCAGCAGA CGCTGCTGCT CAACGGTCTT
CGCGACCGGA TCGTGGTGCA GGTCGACGGC CAGCTCAAGA CCGGCCGGGA CGTCATCGTG
GCCGCGCTGC TCGGCGGCGA GGAGTTCGGC TTCGCCACCG CGCCGCTGGT CGTCTCCGGC
TGCATCATGA TGCGCGTGTG CCATCTGGAC ACCTGTCCCG TGGGTGTTGC CACCCAGAAC
CCGGTGTTGC GGCGCCGGTT CACCGGCAAG CCGGAGTTCG TGGAGAACTT CTTCCTGTAC
ATCGCGGAAG AGGTGCGCGA GCTGCTCGCC GAGCTCGGCT TCCGCACCCT GCAGGAGGCC
GTTGGCCAGT CGCACGTGCT CGACACCCAG GCGGCACAGC AGCATTGGAG CGGTGCCAAG
GCCGGCAAGC TCGATCTGGC ACCGATCCTG GCGCAGGTCG ACTCGCCGTT CATGAACCAG
GATCCGTACT GCTCGCAGAC GCAGGAGCAC GGTCTGGAGA AGGCGCTCGA TCAGCAACTG
ATCACGCAGG CGCGGGTGGC CATCGACACC GGTGCGCCCG TGTCGATCCA GTCGGCGATC
TCGAACGTGA ACCGCACCGT GGGCACGATG CTCGGTCACG AGGTCACCAA GGTGCATGGG
GCCGACGGGC TTCCGGACGA CACCATCGAC ATCACCTTCC GCGGCAGCGC GGGCAACAGC
TTCGGCGCCT TCGTGCCGAA GGGCATCACG CTGCGGCTCG AGGGCGATGC GAACGACTTC
GTGGGCAAGG GCCTCTCGGG CGGCCGCATC GTGGTCCGCC CGGCGCAGGA CGCACCGGAG
GGCTTCATCG CCGAGGAGAA CATCATCGCG GGCAACGTGA TCCTGTTCGG TGCCACCGCC
GGCGAGGTGT TCCTGCGCGG TAAGGCGGGT GAGCGGTTCG CGGTGCGTAA CTCGGGCGCG
ATCGCCGTGG TCGAGGGCGT GGGCGACCAC GGCTGCGAGT ACATGACCGG CGGCCGGGTG
ATCGTGCTCG GCGACACCGG GCGCAACTTC GGCGCCGGTA TGAGCGGCGG CATCGCGTAC
GTCTACAACG CCGACGGCCA GTTCGAGCGC GATCTCAACA CCGAACTGGT GGAGCTGGAA
TCCCTCGACG AATCCGACAT CGAGTTCGTG CGCGCCACCG TGACCAAGCA CTACGAGGCC
ACCGATTCCG CCATCGCGGA ACGGATCCTG GCCAATTGGG CCCGGGAGCG CCAGCTCTTC
GCCAAGGTGA TGCCGCGTGA CTTCAAGCGC GTGCTCACCG CCATCAAGCG TGCCGAACTG
GACGGCCGCA ACATCGACGA CGCAGTGATG GAGGCCGCTC GTGGCTGA
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| Protein sequence | MSRFVPPGPQ GLYHPANEHD ACGVAFVVDM HGRKSRDIVD KAITALVNLE HRGAAGAEPN
TGDGAGILIQ VPDRFFREVV DFDLPHQGAY ATGIAFLPQA AAEAGKAAEG VERIVAEEGM
TVLGWRDQPT DDGSLGALAR DAMPTMRQVF IAGTDAEGAP LSGLDLERRC FVIRKRVERE
LGTDGAGAGS QGEESVYFPS LSGQTFVYKG MLTTPQLRGF FVDLQDERVE SALGLVHSRF
STNTFPSWPL AHPYRRVAHN GEINTVGGNE NWMRAREALL DPSVFGADAE NKIFPICTQG
GSDTARFDEV LELLHLGGRS LPHAVLMMIP EAWERHQDMD PARRAFYEYH SSLMEPWDGP
ASVCFTDGTV IGAVLDRNGL RPSRIWVTKD GLVVLGSEVG VLDIPHSDVV FKTRLQPGRM
FLVDTAQGRI VSDKEIKDEL AAAEPYQEWL DEGLLRLSEL PDRPHPVMPH DRVTQRQQMF
GYTTEELNLL LTPMAKTGAE AIGSMGTDTP VAVLSLRPRL LFDYFQQLFA QVTNPPLDAI
REEIVTSLGG TIGGESDLLN PSPVSCRQIH LDQPILNNDE LIKLVKVNDD GTLPEFRSVV
IPGLYAVAEG GKGLREALDT VRTQVSEAIA GGARLIILSD RNSDRLLAPI PSLLLTAAVH
HHLVRERSRT KVGLIVESGD AREVHHMAAL IGCGAAAVNP YMAFATIEDM HLRGELNGLP
LEKLNANYVK AAGKGVLKVM SKMGISTLAS YTGAQLFQVI GIAQDVVDEF FSGLQSQLDG
IGLDEIADDV AARHKRAMND RPEELAHREL EVGGEYQWRR EGEYHLFNPD TVFKLQHATR
TGQYKVFKEY TKLVDDQSAR LASLRGLFTF VPDREPIPLD EVEPASEIVK RFSTGAMSYG
SISAEAHETL AIAMNRLGGR SNSGEGGEDP ARFTPDENGD LRRSAIKQVA SGRFGVTSHY
LSNCTDIQIK MAQGAKPGEG GQLPPHKVYP WVAEVRGSTP GVGLISPPPH HDIYSIEDLA
QLIHDLKNAN PSARIHVKLV SELGVGTVAA GVSKAHADVV LISGHDGGTG ATPLTSVKHA
GAPWEIGLAE TQQTLLLNGL RDRIVVQVDG QLKTGRDVIV AALLGGEEFG FATAPLVVSG
CIMMRVCHLD TCPVGVATQN PVLRRRFTGK PEFVENFFLY IAEEVRELLA ELGFRTLQEA
VGQSHVLDTQ AAQQHWSGAK AGKLDLAPIL AQVDSPFMNQ DPYCSQTQEH GLEKALDQQL
ITQARVAIDT GAPVSIQSAI SNVNRTVGTM LGHEVTKVHG ADGLPDDTID ITFRGSAGNS
FGAFVPKGIT LRLEGDANDF VGKGLSGGRI VVRPAQDAPE GFIAEENIIA GNVILFGATA
GEVFLRGKAG ERFAVRNSGA IAVVEGVGDH GCEYMTGGRV IVLGDTGRNF GAGMSGGIAY
VYNADGQFER DLNTELVELE SLDESDIEFV RATVTKHYEA TDSAIAERIL ANWARERQLF
AKVMPRDFKR VLTAIKRAEL DGRNIDDAVM EAARG
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