Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tneu_1980 |
Symbol | |
ID | 6165574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermoproteus neutrophilus V24Sta |
Kingdom | Archaea |
Replicon accession | NC_010525 |
Strand | + |
Start bp | 1743859 |
End bp | 1744554 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641669143 |
Product | deoxyribonuclease V |
Protein accession | YP_001795341 |
Protein GI | 171186422 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.102855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTAA ATACCGAGGT TGCGAGAAAG ATCCAAGAGC TTCTGGCCAA GAGGGTCACG GCGGCGCCTC TGCCCTCCTA CAACACCGTA TGCGGTCTCG ACGTTGCGTA CAGCGGCGAT GTGGCATATG GAGCGGCCGT GGTGGTAGAT GTGCGGTCTT TAGCAGTAAC CGAGGCAGCT TGTGCAGCCA CGAAAAACTT GGTGCCCTAT GTGCCAACCT TCCTCGCCTT TAGGGAGCTA ACTCCTATGC TACGCGCCTA TGTAAAGCTC AGGTATCAAC CAGACGTTGT GCTCGTGGAC GGCCATGGCG TGGCCCACCC CCGAAGATTC GGCATAGCCT CACACATAGG GGTAGTTCTC AAGAGGCCGA CAGTCGGCGT TGCCAAGTCC AGGCTCTACG GGGTAGAGAG GGGGGACGCC GTATATGACC CAGAAACAGG CGAGGTCATC GCTAGGGTGC TACGGTGTGG TGGTAAGAGA TACGTGTCGG TGGGGTCCCA CGTGACGCTT GAGGACGCGG CTGCCCTCGT CCAGAGATTA TGTATCGGCG GAGACGTCTA CCCGCTGAGG CTTGCCCACG ATCTCACACA GAGGCTTAAG AGAGTCCGCC CGTCTTCTTT CGACCAATGG GGTGAGGGTA GGATTGAGGA CGACGTGTGT ACAGTTAAGC GGCTTGGCGC CGGGGGTGGG ATTTGA
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Protein sequence | MPLNTEVARK IQELLAKRVT AAPLPSYNTV CGLDVAYSGD VAYGAAVVVD VRSLAVTEAA CAATKNLVPY VPTFLAFREL TPMLRAYVKL RYQPDVVLVD GHGVAHPRRF GIASHIGVVL KRPTVGVAKS RLYGVERGDA VYDPETGEVI ARVLRCGGKR YVSVGSHVTL EDAAALVQRL CIGGDVYPLR LAHDLTQRLK RVRPSSFDQW GEGRIEDDVC TVKRLGAGGG I
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