Gene Tneu_1972 details

Gene Information

• Locus tag: Tneu_1972
• Symbol: rps9p
• ID: 6166052
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermoproteus neutrophilus V24Sta
• Kingdom: Archaea
• Replicon accession: NC_010525
• Strand: +
• Start bp: 1737468
• End bp: 1737908
• Gene Length: 441 bp
• Protein Length: 146 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641669135
• Product: 30S ribosomal protein S9P
• Protein accession: YP_001795333
• Protein GI: 171186414
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0103] Ribosomal protein S9
• TIGRFAM ID: [TIGR03627] archaeal ribosomal protein S9P

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.038178
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 43
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGATGTGA AAACGCCGTG GGCTAAGGTT CTGCAGGAGA CGCCTAGGGT TGTAATAGCG 
GTAGGCAAGA AGAAGACGGC TGTTGCAAGG GCGGTGATTA AGCCGGGCGT TGGGCGAGTT 
AGGATCAACG GATATCCCCT GGAGCTTTGG CCTATAGAGA TGGCTAGGCT TAAGATGTCT 
GAGCCGCTCA TCCTCGCGGG GGATCTCGCC AGGAAAGTGG ACATTGATGT CAACGTCGCC 
GGCGGAGGAT ACATGGGCCA AGCCACCGCC GTCAGGATCG CAATTGCCAG AGGTCTCGTC 
GCGTTTTTCC AGAGCCAGGA GCTGAAGGAG GTGTATGAGA AGTACGACCC GTACATGTTG 
AAGGGCGACC CGAGGAGGGC TGAGCCTAAG AAGCCGGGTA TAAAACACGC GAGGAGTAAG 
AGGCAGAAGG CCTATAGATG A 

 

Protein sequence

MDVKTPWAKV LQETPRVVIA VGKKKTAVAR AVIKPGVGRV RINGYPLELW PIEMARLKMS 
EPLILAGDLA RKVDIDVNVA GGGYMGQATA VRIAIARGLV AFFQSQELKE VYEKYDPYML 
KGDPRRAEPK KPGIKHARSK RQKAYR