Gene Tneu_1971 details

Gene Information

• Locus tag: Tneu_1971
• Symbol: rpl13p
• ID: 6165958
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Thermoproteus neutrophilus V24Sta
• Kingdom: Archaea
• Replicon accession: NC_010525
• Strand: +
• Start bp: 1736913
• End bp: 1737461
• Gene Length: 549 bp
• Protein Length: 182 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641669134
• Product: 50S ribosomal protein L13P
• Protein accession: YP_001795332
• Protein GI: 171186413
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01077] ribosomal protein L13, archaeal/eukaryotic

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.00936727
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 41
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGACGG CTATCCTAGA CCTTGAGCGG CTTCCGGAAA GGGGTGAGGT CGTTATAAAC 
GCCGAGGGGC ATATCGCCGG GAGGCTTGCT ACATATATCG CAAAGGCTCT GTTGGAGAAG 
CCCGGGCTGA GGATCGTAGT TGTAAACGCC GAGAAGCTTG TGGTGACGGG GGACGAGAAG 
ATGGTTGTGG AGTGGTTTAA GCGGAAAATC AGCGAATGGG GGACACACTA CAACCCGGAG 
AAGGCTGGGC CTAAGATACC CAGGAGACCC GACAGAGTTT TCAAGAGGAT GGTGCGGGGG 
ATGCTTCCCA AGAGGGCCGA GAGCGGCCGA AGAGCCTTGA AGCGGCTGAG AGTCTACGTA 
TCGGTGCCCA TGGAGCTACT GAGCAGGAAG CGGCTTGTAG TATATGAGGT CCCGCCGGCG 
AAGCTTAGGA TGAGGCCTTT GGCCAAATAC GTCACGTTGG AGGAAGTTTG GCGTCAGGTG 
GACCCAGCTG CCTGGGAGCA GTGGAAGAAG GCGCAGGAGC TTTGGCAAAA AAGATTAAAA 
CCGAGCTAG 

 

Protein sequence

MKTAILDLER LPERGEVVIN AEGHIAGRLA TYIAKALLEK PGLRIVVVNA EKLVVTGDEK 
MVVEWFKRKI SEWGTHYNPE KAGPKIPRRP DRVFKRMVRG MLPKRAESGR RALKRLRVYV 
SVPMELLSRK RLVVYEVPPA KLRMRPLAKY VTLEEVWRQV DPAAWEQWKK AQELWQKRLK 
PS