Gene Tneu_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTneu_1940 
Symbol 
ID6164443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermoproteus neutrophilus V24Sta 
KingdomArchaea 
Replicon accessionNC_010525 
Strand
Start bp1710996 
End bp1711346 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content58% 
IMG OID641669103 
Producttranscriptional regulator, TrmB 
Protein accessionYP_001795301 
Protein GI171186382 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.600204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACTG CCGTGCTTCT CGTAGCTCAG ATAGCGGCTT TACTTATAGC GATATACGCA 
GGCAGGTCAA AGCTGAGGAG GCTTATAAAC GGCGCTCAAA ACGCCGCGCC TCCTGCGGAG
CCGCTGGCCG ACGATCTGCC GGATATAGAC AGGGCTATCC TGAGGCTGTT GGAGGAGCGC
CAGGGGGTGG TCTACCAGAG CGAGATAGTC AAAGAGTTGG GCCTCCCCAA GAGCACCGTA
CATAAGGCGC TGCGGAGGCT CAGCGAGGCT GGATACGTGG AGATACAGAA GAGGGGCCGG
CTCAACCTCG TGGTGCTGAA GAGGGCTACC TCAGAGGCCT CAGCAACTTG A
 
Protein sequence
MLTAVLLVAQ IAALLIAIYA GRSKLRRLIN GAQNAAPPAE PLADDLPDID RAILRLLEER 
QGVVYQSEIV KELGLPKSTV HKALRRLSEA GYVEIQKRGR LNLVVLKRAT SEASAT